ggKbase home page

PLM3_127_b1_sep16_scaffold_1452_1

Organism: PLM3_127_b1_sep16_Deltaproteobacteria_55_8

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 3..845

Top 3 Functional Annotations

Value Algorithm Source
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 30.5
  • Coverage: 279.0
  • Bit_score: 154
  • Evalue 8.60e-35
NMT1/THI5 like domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 28.1
  • Coverage: 199.0
  • Bit_score: 72
  • Evalue 1.60e-10
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 31.9
  • Coverage: 279.0
  • Bit_score: 162
  • Evalue 7.60e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 843
CGAAAGCACGGGCTAGAGGTCGAATATCTCGCTCTCAACACCGGCCGGTTGGGCATGCAAATGCTTTTATCGGACGACGTTCAAGTGCTGTTCTCGACCGGCGTAACGGTCGTGGCGACCAACTTACAGCGGCCGGACCTGGCGATCATCGCCGGCGGTCTGAATTTCTTTCCGACCAAGCTGGTTGCCCGTCCGGAAATCAAAAGGCCCGCTGATCTGAAGGGTAAAATTCTTGCCGTCGGCGGCTTTGGCGCGGCCAATCACATGGCTTTGCTGGTCGCCTTGGAAAAGCTCGGCGTGAGCGCCAAGGAAGTGAGCATTATCCAGGTAGCCGGCGGGGCGGCGCAGCTCGCGGCGCTGACGAAAGGCGCGGTGCAGGGGCTGATGTTTAACGAACCCCAAGCCACCATCGCCATCAACAAATTCGGCATGCAATCGTTAATCGACCTGATGGAAAGCAAAATCCCTTTTCCGCAGAATTGTTTCATCGTAAAAAGAAATTATTTGGAGTCCAATCGCGACAAGGTCGTCAATTTCATGAAAGCGGTGATCGACGCGGTCTACCTGCTCAAGAGAGATCGCGCACTGGCGCTGCGGCTGATCAAAAAATACATTCGCGTTACCGATGAAGAAGCGGCCATCGGTTACGATTACTATCTGGCAAAGCACAGCGAGGGAATTTTAGACCTGCCCGAGCGAAGAGGTCTTCAGTTCGTCATTGAAGAAACCGCCAAAACCAATCCCAAAGCCGCCGGACAAACTCCGGAATCTCTGAAATTGCTGGAACCTTCGGTTCTTGACGAGATCAAGAAGAGCGGCTTTCTCGAACGAGCGAAGAGATAG
PROTEIN sequence
Length: 281
RKHGLEVEYLALNTGRLGMQMLLSDDVQVLFSTGVTVVATNLQRPDLAIIAGGLNFFPTKLVARPEIKRPADLKGKILAVGGFGAANHMALLVALEKLGVSAKEVSIIQVAGGAAQLAALTKGAVQGLMFNEPQATIAINKFGMQSLIDLMESKIPFPQNCFIVKRNYLESNRDKVVNFMKAVIDAVYLLKRDRALALRLIKKYIRVTDEEAAIGYDYYLAKHSEGILDLPERRGLQFVIEETAKTNPKAAGQTPESLKLLEPSVLDEIKKSGFLERAKR*