ggKbase home page

PLM3_127_b1_sep16_scaffold_5890_1

Organism: PLM3_127_b1_sep16_Deltaproteobacteria_55_8

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 3..758

Top 3 Functional Annotations

Value Algorithm Source
two component, sigma54 specific, Fis family transcriptional regulator; K02481 two-component system, NtrC family, response regulator bin=GWC2_NOV_55_46 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 244.0
  • Bit_score: 248
  • Evalue 3.90e-63
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.0
  • Coverage: 239.0
  • Bit_score: 233
  • Evalue 3.70e-59
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 237.0
  • Bit_score: 258
  • Evalue 5.30e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_RIF03_38_15 → RIF3 → Bacteria

Sequences

DNA sequence
Length: 756
CACGAGAAAGGATCTTTCACCGGGGCTCATGCCCAGAAGCGGGGGAAATTCGAGCTGGCGCACACCGGCACTTTGTTTTTAGATGAAATCGGCGAGCTCGCTCCGCCGCTCCAGGTCAAGCTCCTGCGTTTTTTGCAAGATCGCAAAATCGAGCGAGTGGGCGGCACTCAACCGATCGACGTCGATGTCCGCATCATCGCCGCGACCAACCGCGACCTGAAAAAGGACATGGAGAACCGGGTCTTCCGCGAAGACCTCTACTATCGATTAAAGGTCGTACCGCTCGACATGCCGCCGCTCCGTGAAAGAAAGGAAGACATCATCCCGCTCGCCCAACACTTTCTGAAAAAATTCTGCAAGGAGCACCGCAAGCCGCCCAAGACGTTGTCGCCGGAAGCCGAAGGCGCGCTGCTCATGCATCCATGGCCCGGCAATGTTCGCGAGCTGGAGAATTTGATCAGTCGCTCGGTGGTTTTGAGTCCGCGATCGGTTCTCAAGCCCAGCGACTTGGGTTTTGCGCTGGATCAGATTCCAACCGACGTCAATTTGAAGTTCGCCAAGAAGGCCATTGAAATGGACTTCGTAAAGAAAGCCTTGTCCCGCAACGGCGGCATCGTCAGCCGCGCCGCGCGCGAACTGGGCGTCAGCCGGGTCAATCTCTACGATCTCATCGAGAAGTACAATATTCACCTGCAAGAGTTTAAAATGATCCGAGCGGCAGGCAAGGGACAAATCAAGATACGGGAGGTTTTCTAA
PROTEIN sequence
Length: 252
HEKGSFTGAHAQKRGKFELAHTGTLFLDEIGELAPPLQVKLLRFLQDRKIERVGGTQPIDVDVRIIAATNRDLKKDMENRVFREDLYYRLKVVPLDMPPLRERKEDIIPLAQHFLKKFCKEHRKPPKTLSPEAEGALLMHPWPGNVRELENLISRSVVLSPRSVLKPSDLGFALDQIPTDVNLKFAKKAIEMDFVKKALSRNGGIVSRAARELGVSRVNLYDLIEKYNIHLQEFKMIRAAGKGQIKIREVF*