ggKbase home page

PLM3_127_b1_sep16_scaffold_20469_3

Organism: PLM3_127_b1_sep16_Deltaproteobacteria_55_8

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(1703..1897)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 61.0
  • Bit_score: 99
  • Evalue 7.50e-19
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 60.0
  • Bit_score: 80
  • Evalue 1.30e-13
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 63.0
  • Bit_score: 100
  • Evalue 6.20e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_16 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 195
ATGTCACGCATTACCGTAGAAGACTGTTTGCAGCAGGTTAGCAACCGCTTCGATTTAGTCATGCTGGCTTCTAAACGGGCGAGGCAGCTGTTTAAGGGCGCCCAACCGTTGATCGAGTCGGACAACCGGGAAGTTGTCGTGGCGCTACGCGAGATCGCCGACGGCAAAGTCAGAAAAGCTCCAAGCCAATCCTGA
PROTEIN sequence
Length: 65
MSRITVEDCLQQVSNRFDLVMLASKRARQLFKGAQPLIESDNREVVVALREIADGKVRKAPSQS*