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PLM3_127_b1_sep16_scaffold_30412_3

Organism: PLM3_127_b1_sep16_Deltaproteobacteria_55_8

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 680..1453

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin1_lowGC species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin1_lowGC organism_group=Unknown_CP similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 217.0
  • Bit_score: 226
  • Evalue 2.10e-56
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 187.0
  • Bit_score: 142
  • Evalue 1.20e-31
Tax=CSP1_2_Dadabacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 218.0
  • Bit_score: 226
  • Evalue 3.00e-56

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Taxonomy

CSP1_2_Dadabacteria → Dadabacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGAAACCCGAAAACTTGAAGAGCGCAGCGACAAAAAATGAGGTGACTTCTATGCCAGCTTGTCAAACTTCTACCGACATAAGCTTTTCGACGGCGCAAGTCCCGAGCGTGGCGATCAGCAGGGGTGAACTGGCGTCTCGACGAACATCGAAAGCCCCTCGCGTGACTCGCCGCCGCAAAGCGGGAAACCAAGAAGCCGGTCTTATCGAGCGGCTGAAGGCCGGTGATCAAGCGGCGCTGGAAGCGATCTTCAATCTATACTCTGGCAAGCTTTACAACGTCGCCCATCGTATTATCGGCGAGGCCGCCGATACCGAAGAAGTGATCCAAGACGTTTTCTGGACCGTCTATCGAAAGGCAAAAACTTTCCAAGGTCACTCGCAATTTTCGACCTGGCTCTACCGCCTGACCGTCAACGCCGCCCTCGGAAAGATTCGCGGCAGCAAGAGAAATAAGGAAGTCGAGTACGAGGAATTTCTGCCCAAGTTTCAAGACGACGGACACCACATGGTTCATCCCGTGGTGGATTGGTCCGACACGCTCGACGAGAAATACGCCCGGCGTGAATTGCAAGAACTATTGGGGCAGGCTTTGAGCCAATTGAAACCCTTGGACAAAGCTGTCATCGTCCTCAGCGATCTGGAAGGCCTTTCGGACAGTGAGATCGCCGCGTCGGTGGAACTCACGGTATCCGCAGTTAAAACGCGGCTACACCGCGCGCGACTTTTTCTCCGCGGCAAGTTGGCCGTCCATCTCGGTCACTCTGCAGCCTAG
PROTEIN sequence
Length: 258
MKPENLKSAATKNEVTSMPACQTSTDISFSTAQVPSVAISRGELASRRTSKAPRVTRRRKAGNQEAGLIERLKAGDQAALEAIFNLYSGKLYNVAHRIIGEAADTEEVIQDVFWTVYRKAKTFQGHSQFSTWLYRLTVNAALGKIRGSKRNKEVEYEEFLPKFQDDGHHMVHPVVDWSDTLDEKYARRELQELLGQALSQLKPLDKAVIVLSDLEGLSDSEIAASVELTVSAVKTRLHRARLFLRGKLAVHLGHSAA*