ggKbase home page

PLM3_127_b1_sep16_scaffold_31078_2

Organism: PLM3_127_b1_sep16_Deltaproteobacteria_55_8

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(452..886)

Top 3 Functional Annotations

Value Algorithm Source
Cupin 2, conserved barrel Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q113L0_TRIEI similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 142.0
  • Bit_score: 115
  • Evalue 3.90e-23
cupin 2 barrel domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 142.0
  • Bit_score: 115
  • Evalue 1.10e-23
Cupin 2, conserved barrel {ECO:0000313|EMBL:ABG51314.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Trichodesmium.;" source="Trichodesmium erythraeum (strain IMS101).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.5
  • Coverage: 142.0
  • Bit_score: 115
  • Evalue 5.50e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Trichodesmium erythraeum → Trichodesmium → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 435
ATGGAAGCTTCGACGTTCAAACTCAAGACACCACATATCACCGGCGGGCGCAGTCATATTCCTCTCGCGCAAACCGAGCATATGACCATCGGGCTCAACTACTACATCCCCGGCCGGAAAAATAAGCTGCATACCCATCCCGGCGAAGATCATACGTTCGTCGTGATGGATGGGCAGGCGACTTTCTACAACAAAGAGCATGAACCGACCGTGCTCAACAAAGGCGAAGGCATCATTCTGCCGGAAAATCATTACTACTATTTTCAGAGCACCGGCGATAAGCCGCTTGCGCTGTTTCGTGTAAGTGCGAAGAAAGGCAACAAGCCAAAAGTCCTTCGCGTCGACAGCGAAGGTAATCGGCGGACTGAGGAGGAAATTGATTTCGTGGTCGTGGACGGGCAAGTGGTTGAAGGGCAGTTCTGGGAAATGAACTAG
PROTEIN sequence
Length: 145
MEASTFKLKTPHITGGRSHIPLAQTEHMTIGLNYYIPGRKNKLHTHPGEDHTFVVMDGQATFYNKEHEPTVLNKGEGIILPENHYYYFQSTGDKPLALFRVSAKKGNKPKVLRVDSEGNRRTEEEIDFVVVDGQVVEGQFWEMN*