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PLM3_127_b1_sep16_scaffold_22575_1

Organism: PLM3_127_b1_sep16_Methylomirabilis_oxyfera_62_20

near complete RP 46 / 55 MC: 1 BSCG 45 / 51 MC: 1 ASCG 11 / 38
Location: comp(3..1340)

Top 3 Functional Annotations

Value Algorithm Source
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 446.0
  • Bit_score: 815
  • Evalue 6.90e-234
DNA-directed RNA polymerase subunit beta' Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK26_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 446.0
  • Bit_score: 815
  • Evalue 2.40e-233
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 446.0
  • Bit_score: 820
  • Evalue 6.30e-235

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Taxonomy

R_NC10_66_22 → NC10 → Bacteria

Sequences

DNA sequence
Length: 1338
GTGGATAAGTTTTTCGGATTCTACGACGAAAAGCCGGTCGATCCCACAAGTTTTAAGGCGATTCGAATCGGGCTCGCGTCGCCGGAAAAGATCCGCTCGTGGTCCTTCGGAGAGGTGAAAAAGCCGGAGACCATCAACTATCGGACCTTCAAACCTGAGCGGGATGGACTGTTCTGCGCCAAGATTTTCGGACCCACGAAGGACTGGGAGTGCAACTGTGGCAAGTACAAGGGCATAAAGCACAAGGGCGTCGTCTGCGACAAGTGCGGCGTGGAGGTGATCAGAAGCAAGGCGCGACGCCAGCGCCAGGGCCACATCGAGCTGGCCTCACCGGTGGTCCACGTCTGGTTCTTCAGGGGGGTTCCGAGCAGGATCGGCTATCTCCTCGACATGTCCCTGCGAGACCTGGAGAAAGTGCTCTATTTCGAGGAGTATGTGGTTGTCGAACCCGGAAAGACTCCTCTCCCCATCAAACAGCTCCTGACTGAGGATCAGTACCGCCGTGCTCAGGAAGAGTACGGCGATGGATTCAGGGCGGGAATGGGCGCGGAGGCCATCCGGGAACTGTTGAAGCGAATCTCCGTTCGCGAACTGGCCGAGAGTCTCCGCGCTCAAATGCTGGAGGAGATCTCTCAACAGAATCGCAAGAAGATCACCAAGCGGCTCCGGATCGTGGAGGCCTTCATCAACTCGGGGAATAAGCCGGAATGGATGATCCTTGAGGTGATCTCGGTCCTGCCGCCCGAACTTAGGCCCCTCGTTCCCCTCGACGGCGGGCGCTTCGCCACCTCGGACCTGAACGACCTCTACCGGCGAGTCATCAACCGAAACAATCGCCTGAAACGCCTCATTGAATTGAAGGCCCCTGAGATCATCATCCGCAACGAAAAGCGGATGCTGCAGGAGGCGGTGGACGCCCTCTTCGATAACGGGCGTCGTGGCCGCGCGCTGAAAGGGCAAAACAACAGGCCGCTGAAGTCGCTTTCCGAAATGCTGAAGGGGAAGCAGGGTCGCTTCCGACAGAACCTGCTCGGGAAGCGGGTGGATTACTCGGGGCGATCGGTGATCGTGGTGGGGCCCGAGCTGAAGCTTCACCAGTGCGGCTTGCCGAAGAAGATGGCCCTGGAGCTCTTCAAGCCTTTTATCTTCAAGAAGCTGCTCAAGGACAATGAGCATGTCACCACCATCAAGAGCGCCAAGAAGCTGGTGGAGAAGGGCACGCCTGAGGTGTGGGACGCGTTGGAGGAGGTGATCCGCGAACACCCGATCCTCCTGAACCGCGCCCCGACCTTGCATCGCCTCGGCGTCCAAGCCTTTGAGCCCGTCCTTGTTGAGGGG
PROTEIN sequence
Length: 446
VDKFFGFYDEKPVDPTSFKAIRIGLASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAKIFGPTKDWECNCGKYKGIKHKGVVCDKCGVEVIRSKARRQRQGHIELASPVVHVWFFRGVPSRIGYLLDMSLRDLEKVLYFEEYVVVEPGKTPLPIKQLLTEDQYRRAQEEYGDGFRAGMGAEAIRELLKRISVRELAESLRAQMLEEISQQNRKKITKRLRIVEAFINSGNKPEWMILEVISVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELKAPEIIIRNEKRMLQEAVDALFDNGRRGRALKGQNNRPLKSLSEMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKKMALELFKPFIFKKLLKDNEHVTTIKSAKKLVEKGTPEVWDALEEVIREHPILLNRAPTLHRLGVQAFEPVLVEG