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PLM3_127_b1_sep16_scaffold_95330_2

Organism: PLM3_127_b1_sep16_Methylomirabilis_oxyfera_62_20

near complete RP 46 / 55 MC: 1 BSCG 45 / 51 MC: 1 ASCG 11 / 38
Location: comp(310..957)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin3_NC10 species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin3_NC10 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 215.0
  • Bit_score: 254
  • Evalue 8.00e-65
RNA polymerase, sigma-24 subunit, RpoE similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 189.0
  • Bit_score: 138
  • Evalue 1.40e-30
Tax=CSP1_5_NC10 similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 215.0
  • Bit_score: 254
  • Evalue 1.10e-64

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Taxonomy

CSP1_5_NC10 → NC10 → Bacteria

Sequences

DNA sequence
Length: 648
ATGGGCCAGAGAGGATCGACAGAGGTCCTTCACTCGACGGCAAAAGGCCGGACTTCCTACGACGAAGAGCGGGTGCTCATTCAACGGGTGAAGGCTGGCAACCACGAGGCCTTCGAGGCGATCTTCCGTCAGCACGTCTCCAGGGTCTACCGACAGGCGTTCAAGCTCATTGGGAATGAGGCGGAGACGGAAGAGGTCGTCCAGGAAGTGTTCCTGGCGGTCCATCAGAAGGTCAAAACGTTCCGAGGCGAATCGGCCTTCTCCACGTGGCTCTACCGCCTCACCACGAATGTGGCCTTGAGCAGGCTCCGCAAGCGGAAGAGAAGCAAAGAGGTCCTCCTGGACGATTATTTGCCCCGGTTCCATGAGGACGGCCATCATGAGGTGAGGCCGGTATTCAATTGGGCGAACGAGCTCGATCTGCGCCTTGAGAAGCAGGAGCTGCACCGGCTGATCCGAGAGGCCCTCGAGGAACTCCCGCCGGTGGATAAGGCCGTGATCATCTCAAGTGATCTGGAGGGGATCTCGAATCGCGAGATCGGTGAATCCCTGCGGCTCAGCATTCCGGCGGTCAAGGGGCGACTCCATCGCGCGCGTCTCTTCCTACGGGGAAGGTTAGCGGTCTCTCTCGGATATTCACCTTCTTGA
PROTEIN sequence
Length: 216
MGQRGSTEVLHSTAKGRTSYDEERVLIQRVKAGNHEAFEAIFRQHVSRVYRQAFKLIGNEAETEEVVQEVFLAVHQKVKTFRGESAFSTWLYRLTTNVALSRLRKRKRSKEVLLDDYLPRFHEDGHHEVRPVFNWANELDLRLEKQELHRLIREALEELPPVDKAVIISSDLEGISNREIGESLRLSIPAVKGRLHRARLFLRGRLAVSLGYSPS*