ggKbase home page
Advanced Search
Search Help

PLM3_127_b1_sep16_scaffold_11268_2

Organism: PLM3_127_b1_sep16_Rokubacteria_70_8

partial RP 38 / 55 MC: 1 BSCG 40 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: 415..4476

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 1312.0
  • Bit_score: 1793
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 1341.0
  • Bit_score: 2368
  • Evalue 0.0
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 1341.0
  • Bit_score: 2368
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 4062
ATGCTGACGGACCGGCCTTTCGGCAGCCTGGTACGCGAGGACAAGCCTGCCAAGGACCTGTGGGGCATCCTGGACCGCCACCCGAAGCCGCTGAGCTTCGGGGCGATCCGTATCAAGCTCGCATCGCCGCAGAAGATCCGCGACTGGTCGCACGGGGAAGTCAAGAAGCCGGAGACCATCAACTACCGGACGTTCAAGCCGGAGCGCGACGGCCTGTTCTGCGCGCGCATCTTCGGCCCGACCAAGGACTACGAGTGCGCCTGCGGCAAGTACAAGCGCATGAAGTTCGCGGGCGTCATCTGCGACAAGTGCGGCGTCGAGGTCACCCGGGCCCGCGTGCGCCGCGAGCGCATGGGCCACATCGAGCTGGCCTCACCGGTCTCCCACGTCTGGTTCTTCAAGGGCCTGCCCTCGCGGATCGGGCAGCTCCTCGACATGTCGCTGCGCGAGCTCGAGAAGATCCTCTACTTCGAGGAGTACGTGGTGGTGGACCCCGGTCGGGTGCCCGGGCTCAAGAAGAAGGACCTGCTGTCGGTGGACCGTGTCCGCAAGCTGACCGAGGAGCACGGCCACGAGGCGTTCTCCGCCGGCATGGGCGCGGAGGCCATCCGGGAGCTGCTGCGCGGCATGGACATGGACGTGCTGGCCCGCGAGCTGCGCGCCGGCATGGGGGTGGAGACGTCGGCCCAGAAGAAGAAGAAGATCGTCAAGCGCCTCAAGGTGGTGGAGGCGTTCCTCAAGTCCGGCAACCAGCCGGAGTGGATGATCCTCGAGGTGCTGCCGGTGATCCCGCCCGAGCTGCGCCCGCTGGTGCCGCTCGACGGGGGCCGCTTCGCGACCTCGGACCTGAACGATCTCTACCGGCGCGTGATCAACCGCAACAATCGGCTCAAGCGCCTGATGGAGCTCCGCGCGCCCGAGATCATCATCCGCAACGAGAAGCGGATGCTGCAGGAGGCGGTGGACGCCCTCTTCGACAACGGGCGCCGGGGCCGGGTCATCACCGGGCCCAACAATCGCCCGCTGAAGTCCCTGTCCGACACGCTGAAGGGCAAGCAGGGCCGCTTCCGCCAGAACCTGCTCGGCAAGCGGGTGGACTACTCCGGGCGCTCGGTCATCGTGGTGGGCCCGTACCTCAAGCTGCACCAGTGCGGCCTGCCCAAGAAGATGGCGCTCGAGCTCTTCAAGCCGTTCATCCTCCGCAAGCTGGAGGAGCGGGGCATCGCCTCATCCATCAAGGCGGCCAAGAAGTACGTGGAGAAGGAGCGGCCCGAGGTGTGGGACATCCTGGAAGAGGTCATCCAGGAGCATCCGGTGCTGCTGAACCGGGCGCCCACGCTCCACCGCCTAGGCATCCAGGGCTTCGAGCCCATCCTGGTCGAGGGCAAGGCCATCGAGATCCATCCGCTCGTGTGCACGGCTTTCAACGCGGACTTCGACGGTGACCAGATGGCGGTGCACGTGCCGCTCTCCATGGAAGCCCAGATGGAGACGCAGGTGCTGATGCTGTCCGCCAACAATATCCTGTCGCCCTCCAACGGGGCGCCGGTGGCGGTGCCGACCCAGGACATGGTGTTCGGCATCTACTACATGACCAAGGAGCGCCCGGGGTCCAAGGGCGAGGGCCGGCTCTTCGCGGATTCGGAGGACCTCCGGATCGCCTACGACAACGAGGACGTGGACCTGCAGGCCCGCATCCGGCTGCGCTACAACGGCACCATCATCGAGACCACGGTCGGCCGCACCCTCTTCAACGAGGTGGTGCCGGAGCCGCTCCGGTTCCTCAACAAGGAGCTGAAGAAGAAGGAGATCGGCCAGCTGATCTCCGACTGCTACAACCGGCTCGGCAACGAGGCGACCGTCACCTTCCTCGACGAGCTGAAGGACGTCGGCTTCCGCTACGCGACCCTGTCCGGGCTCAGCATCGGCATCGTGGACATGCACGTGCCCTCGGCGAAGGGCGAGATCATCGGGCGCGCCCGTCAGAACGTCAACGAGGTGGAGCAGCAGTACCAGGACGGCGTCATCACCAACGGCGAGCGCTACAACAAGGTGGTCGACATCTGGGCCCACGTGACCGAGCAGATCGCGGATCAGCTCTTCAAGGAGATGGAGGTGCGCGCCGACAACGGCGACTTCAACCCCATCTTCATGATGGCCGACTCCGGGGCGCGGGGCTCCAAGCAGCAGATCCGGCAGCTCGCGGGCATGCGCGGCCTCATGGCCAAGCCGAGCGGCGAGGTCATCGAGACGCCCATCACGTCGAACTTCCGCGAGGGCCTCACCGTCCTCGAGTACTTCACGTCGACCCACGGCGCCCGCAAGGGCCTGGCCGACACCGCGCTGAAGACGGCGGACTCCGGCTACCTGACCCGCCGCCTGGTGGACGTGGCCCAGGACGTGATCATCTCCGAGTACGACTGCGGCACCGTGAAGTACATCGAGGCCTCGCCGCTCATCGAGGGCGGCGACATCATCCAGTCGCTCCGCGACCGGGTGCTGGGCCGGGTGGCCGCGGGCGACATCCGCGACCCCTACACCGGCGAGATCATCGTGCAGGCCAACTGCGAGATCGTGGAAGACCTGGCCCAGAAGATCGAAGATTCGGGCCTCGAGCGGGTCCGCATCCGGTCCGCGCTCACCTGCGAGTCCAAGCGCGGCATCTGCGTGATGTGCTACGGGCGTAACCTGGGCACCGGCAACCTGGCCGAGCTCGGGGAGGCGGTCGGCATCATCGCGGCCCAGTCCATCGGCGAGCCGGGCACCCAGCTCACGATGCGGACCTTCCACATCGGCGGCACCGCGAGCAAGGTCGTGGCCACCTCCCGGCACGACGCCAAGAACCCCGGCGTGTTGACCTACCACAATATCCGGTGGGTCGAGAACCGCGATGGCGAAGTGGTGGCCCTGAACCGAAACGGGGAAGTGATCCTGCACGACGAGAAGGGCCGCGAGAAGGAGCGGTATCCGGTCGTCCCCGGCGCCAAGATCAAGTTCCGGGACGGGGCCCGGGTGCCGAAGAGCGGCGTCACCATCGTGGAGTGGGACCCGTTCACGACCCCGATCCTCACCGAGGTGACGGGCACCATCGCCTTCCGGGACGTGGTGGACGAGGTCACGATCCGCGAAGAGATCGACGAGGTCACCGGTCTGGCCCAGCGGGTCATCATCGAGGATCCGGAGAACAAGCTGCAGCCGCGGGTGTCGGTGAAGGCCCCCGCCGGGAGCGCCGAGGCGCCGGGAGCGGTGGACGCGCTCGGTGAGACGCGTGGCCGCTACATGCTGCCGGTGGGTGCCTATCTCCTGGTGGCCGACGGATCCGACGTGCACGCGGGCGACATCATCGCCAAGATCCCGCGGGAGTCGACCAAGACCAAGGACATCACCGGCGGTCTGCCGCGGGTGGCCGAGCTGTTCGAGGCGCGCAAGCCCCGCGAGCAGGCGGTCATCACCGAGATCGACGGAGTGGTGGAGTTCGCCGGCTTCGTGAAGGGCATGCGGAAGATGATCATCCGCGCCGACGACAGCGAGACCAAGGAGTACCTGATCCCGAGCGGCAAGCACATCTCGGTCCGCGAAGGCGACCGGGTGAAGGCGGGCGAGGCCCTCATGGGCGGCTCGCCCAACCCACACGACTACCTGGCCGTGCTCGGCGACCGGGAGCTGCAGCGGTACCTCGTCAACGAGGTGCAGGAGGTCTACCGGCTGCAGGGTGTGACCATCAACGACAAGCACATCGAGATCATCGTGCGCCAGATGCTCCGGCGCGTGCGTATCGAGGAGGTCGGCGGCACCGAGTTCGTGGTGGGCGAGCTGGTCGACAAGTTCGTCTTCCAGGACGAGAACGACAAGGCGGTCGCGGCGGGCAAGTCGGCGGCCACCGCCCAGCCGGTCCTGCTGGGCATCACCAAGGCCTCCCTGTCCACCGACAGCTTCATCTCGGCCGCGTCCTTCCAGGAGACCACCCGGGTCCTGACCGAGGCCGCCATCAGCGGCAAGGTCGACGACCTGCGCGGGCTCAAGNNNNNNNNNNNNNNNNNNNNNNCCGGGTGGAGGTCCTGA
PROTEIN sequence
Length: 1354
MLTDRPFGSLVREDKPAKDLWGILDRHPKPLSFGAIRIKLASPQKIRDWSHGEVKKPETINYRTFKPERDGLFCARIFGPTKDYECACGKYKRMKFAGVICDKCGVEVTRARVRRERMGHIELASPVSHVWFFKGLPSRIGQLLDMSLRELEKILYFEEYVVVDPGRVPGLKKKDLLSVDRVRKLTEEHGHEAFSAGMGAEAIRELLRGMDMDVLARELRAGMGVETSAQKKKKIVKRLKVVEAFLKSGNQPEWMILEVLPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPEIIIRNEKRMLQEAVDALFDNGRRGRVITGPNNRPLKSLSDTLKGKQGRFRQNLLGKRVDYSGRSVIVVGPYLKLHQCGLPKKMALELFKPFILRKLEERGIASSIKAAKKYVEKERPEVWDILEEVIQEHPVLLNRAPTLHRLGIQGFEPILVEGKAIEIHPLVCTAFNADFDGDQMAVHVPLSMEAQMETQVLMLSANNILSPSNGAPVAVPTQDMVFGIYYMTKERPGSKGEGRLFADSEDLRIAYDNEDVDLQARIRLRYNGTIIETTVGRTLFNEVVPEPLRFLNKELKKKEIGQLISDCYNRLGNEATVTFLDELKDVGFRYATLSGLSIGIVDMHVPSAKGEIIGRARQNVNEVEQQYQDGVITNGERYNKVVDIWAHVTEQIADQLFKEMEVRADNGDFNPIFMMADSGARGSKQQIRQLAGMRGLMAKPSGEVIETPITSNFREGLTVLEYFTSTHGARKGLADTALKTADSGYLTRRLVDVAQDVIISEYDCGTVKYIEASPLIEGGDIIQSLRDRVLGRVAAGDIRDPYTGEIIVQANCEIVEDLAQKIEDSGLERVRIRSALTCESKRGICVMCYGRNLGTGNLAELGEAVGIIAAQSIGEPGTQLTMRTFHIGGTASKVVATSRHDAKNPGVLTYHNIRWVENRDGEVVALNRNGEVILHDEKGREKERYPVVPGAKIKFRDGARVPKSGVTIVEWDPFTTPILTEVTGTIAFRDVVDEVTIREEIDEVTGLAQRVIIEDPENKLQPRVSVKAPAGSAEAPGAVDALGETRGRYMLPVGAYLLVADGSDVHAGDIIAKIPRESTKTKDITGGLPRVAELFEARKPREQAVITEIDGVVEFAGFVKGMRKMIIRADDSETKEYLIPSGKHISVREGDRVKAGEALMGGSPNPHDYLAVLGDRELQRYLVNEVQEVYRLQGVTINDKHIEIIVRQMLRRVRIEEVGGTEFVVGELVDKFVFQDENDKAVAAGKSAATAQPVLLGITKASLSTDSFISAASFQETTRVLTEAAISGKVDDLRGLKXXXXXXXXGWRS*