ggKbase home page

PLM3_127_b1_sep16_scaffold_22222_2

Organism: PLM3_127_b1_sep16_Rokubacteria_70_8

partial RP 38 / 55 MC: 1 BSCG 40 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: comp(297..1154)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 285.0
  • Bit_score: 417
  • Evalue 5.60e-114
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 283.0
  • Bit_score: 360
  • Evalue 2.30e-97
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 285.0
  • Bit_score: 421
  • Evalue 5.40e-115

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_67_28 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 858
GTGGACGTCCCATTTGTGATCCGGCAGCGGCTGGAGGAATTGGGGTTGGAGCAGCAGGATCTCGCCCGCGCCGCCCGCGTGACCGACTCCTACATATCGCAATTACTGACTCGGAAGAAGGCGCCCCCCGCGCCGAGCCGCACCGACATTTATGCCCGCATCGACAAGTTCTTGAAGCTCCCGAGCGGGGAGCTGGCGAAACTGGCGGAGCTCCAGCGCAAGGAAGAATTGAAGCGGGAATTGGGGGAGGACCCCGTGCCCCTGTATCACGAATTTCGTGAGTTGATCCTGCGCAAGTGCAATCGTGAGCAGGAAAAACACGTCCGCGCGATCTTTAAAAAGCAGCCCTTTGGCGAGCTCGAACGCCTGGTCACCCAGAAGCTGCTGGATGTGGTCAAGCGCGTGGCGAAAGACGAACTCGAGAATGACTACTGGCTCCGCATGGTGGCTGGGCTCAGTCACCGCAGCTATGAGGAGATGCGGGTCGTCGTGCTCGAGTTCCTCGATACGGACATCTTCCACGTGTCCGCTGAGAACTGCGTCTCGTTCTTGGATCCGCTGATTGAATCCTGGGACATCGACCTCGCGACGTTCAGTCTGGAGATTGTCTTAAACCACAGCGTTGTCCCAGGGCAGGCGAAGCGATTCGAGTTTGTCGAGCGGGAGGCCGAACAGCCCGCCAGCGAAGAGCCGGGGCTCCAGGAGTTCCTTCAGGATCCTTCCCTCCGCGGCACCGCGACCGCGGAGGAAGTCGCGTTTCTCAAGCAGCTGAGGTTCAAGCACACGCGGCCGACGCCCCTCTACTATTACCGGGAGTTGCAGAACCTCAGAGATCCGCTCCATTTTCGCACCCCATAG
PROTEIN sequence
Length: 286
VDVPFVIRQRLEELGLEQQDLARAARVTDSYISQLLTRKKAPPAPSRTDIYARIDKFLKLPSGELAKLAELQRKEELKRELGEDPVPLYHEFRELILRKCNREQEKHVRAIFKKQPFGELERLVTQKLLDVVKRVAKDELENDYWLRMVAGLSHRSYEEMRVVVLEFLDTDIFHVSAENCVSFLDPLIESWDIDLATFSLEIVLNHSVVPGQAKRFEFVEREAEQPASEEPGLQEFLQDPSLRGTATAEEVAFLKQLRFKHTRPTPLYYYRELQNLRDPLHFRTP*