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PLM3_127_b1_sep16_scaffold_31404_1

Organism: PLM3_127_b1_sep16_Rokubacteria_70_8

partial RP 38 / 55 MC: 1 BSCG 40 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: comp(2..2053)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 689.0
  • Bit_score: 1109
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 684.0
  • Bit_score: 796
  • Evalue 5.10e-228
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 684.0
  • Bit_score: 1127
  • Evalue 0.0

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 2052
ATGGCGCGCAACATCGAGTGCGGGCGCCGGGTCCGCAAGGACTTCGGTAAGATCCCGTCCGTCGTCGAGATCCCGAACCTCATCGAGATCCAGCAGCAGTCCTACGAGCAGTTCTTGCAGAAGGAGATCGCGCCCGAGCGGCGCGACGAGACGGGGCTGCAGGCGGTCTTCAAGTCGGTGTTCCCGATCCAGGACTACAACGGGAACGCCATGCTCGAGTTCCACAGCTACCACTTCGGCGATCCCAAGTACACGGTGGAGGAGTGCCACGACCGGGGCATGACCTTCGCGATCCCGCTGAAGGTCACGCTGCGGCTCAAGGTCATCGACAACGACAAGGAAGCCAAGACCCAGACCGTGCGCGAGGTGCGTGAGCAGGAGGTGTACCTGGGCGAGCTCCCGCTCATGACCGAGAAGGGCACCTTCATCATCAACGGGACCGAGCGGGTGGTCGTCTCGCAGCTCCAGCGCTCGGCGGGTGTGTTCTTCGACGACGACAAGGGCAAGACGGTCGCCTCGGGCAAGCTGCTCTTCTCGGCCCGGGTGATCCCCTACCGTGGCTCGTGGGTGGAGTTCGAGTTCGACGCCAACGACATCCTCTACGTGCGGGTGGACCGGCGGCGCAAGATGCTCGCCACCGCCTTCCTGCGCGCCTTCTGGTTCCTCGAGAAGGGCGTGATCCTCTCCGACGAGGAGATCCTCGGCCAGTTCTACGAGGCGGAGGAGGTGCTCTCCTTCGAGGACCGGATGGCCTGGGTGAAGCTCTCCCCCGAGGTCCACAACGCGGCCAAGGTCGGCGACGACGTGAAGGCGCCCCGCGCCAAGGAGCCGATCGTCCAGGCGGGCAAGACGCTGAACCCGAAGATCATCGAGAAGCTGGTCGAGGCCGGCATCACCAAGATCCCGGTCAGGGCGGAGTCGCTGGTGGGCCGCCGGACCGGAGGTCGCGTGGTGGATGCCGAGACCGGCGAGGTCCTGGTCGAGACGAACCAGGAGATCACCGCCACGCTCCTGGCCCAGATCATGGGCCGGCGGGTGGCCCCCTTCAAGCTGCTCGCGATGGTGCCGGGCAAGACGGACGGCTCGCTGTACGAGACGCTCTCGCGCGATCACTTCAAGAACCCGGACGAGGCCCTCGTGGAGATCTACCGGCGGCTGCGCCCGGGGGATCCGCCCACCGTGGAGTCGGCGCGCGCCCTCTTCCGCGGGATGTTCATCGATCCGCGCCGCTACGACCTGGCCCGCGTCGGGCGCTTCATGATCAACAAGAAGCTCGGCATCGGGGCCAACCTCAACATCAAGACCCTCCGCAGCGAGGACGTGGTCTACGTGGTGCGGCACCTCTTCCAGGTCAAGCTCGGGAGCAAGTCGACCGACGACATCGACCACCTCGGCAACCGGCGCGTCCGCTCGGTGGGCGAGCTGCTCGAGAACCAGTTCCGGGTGGGCCTCACCCGCATGGAGCGCGCGGTCAAGGAGCGGATGTCGATCTCCGACATCACCAACCTGATGCCGCACGACCTCATCAACGCCAAGCCGGTCTCGGCGGTGGTGAAGGAGTTCTTCGGCTCGTCCCAGCTCAGCCAGTTCATGGACCAGACGAACCCCTTGGCCGAGCTGACCCACAAGCGCCGGCTCTCCGCGCTGGGTCCGCGCGGCCTGTCGCGGGAGCGCGCCGGATTCGAGGTGCGCGACGTGCACCCGACCCACTACGGCCGCATCTGCCCGATCGAGACGCCGGAAGGCCCGAACATCGGCCTGATCTCGTCGCTCAGCACCTACGCGCGGATCAATGAGTTCGGCTTCATCGAGACGCCGTATCGTAAGGTCGAGAAGGGCAGCGTGCTGCCGGGCGACCCGGTGTACCTGAGCGCGCTCGAGGAAGAGCGCTACGTCATCGCGCAGGCCAACGCTCAGATGGACGAGCGCGGCCGCTTCCTGCAGGACCGCGTGTCGGCCCGGAAGGGCGGCGAGTACAAGATGGTGTCGCCGGACGAGATTCACTTCATCGACATCTCCCCCAAGCAGCTCGTCTCGGTGGCGGCGGCGATG
PROTEIN sequence
Length: 684
MARNIECGRRVRKDFGKIPSVVEIPNLIEIQQQSYEQFLQKEIAPERRDETGLQAVFKSVFPIQDYNGNAMLEFHSYHFGDPKYTVEECHDRGMTFAIPLKVTLRLKVIDNDKEAKTQTVREVREQEVYLGELPLMTEKGTFIINGTERVVVSQLQRSAGVFFDDDKGKTVASGKLLFSARVIPYRGSWVEFEFDANDILYVRVDRRRKMLATAFLRAFWFLEKGVILSDEEILGQFYEAEEVLSFEDRMAWVKLSPEVHNAAKVGDDVKAPRAKEPIVQAGKTLNPKIIEKLVEAGITKIPVRAESLVGRRTGGRVVDAETGEVLVETNQEITATLLAQIMGRRVAPFKLLAMVPGKTDGSLYETLSRDHFKNPDEALVEIYRRLRPGDPPTVESARALFRGMFIDPRRYDLARVGRFMINKKLGIGANLNIKTLRSEDVVYVVRHLFQVKLGSKSTDDIDHLGNRRVRSVGELLENQFRVGLTRMERAVKERMSISDITNLMPHDLINAKPVSAVVKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPRGLSRERAGFEVRDVHPTHYGRICPIETPEGPNIGLISSLSTYARINEFGFIETPYRKVEKGSVLPGDPVYLSALEEERYVIAQANAQMDERGRFLQDRVSARKGGEYKMVSPDEIHFIDISPKQLVSVAAAM