ggKbase home page

PLM4_32_coex_redo_sep16_scaffold_72159_3

Organism: PLM4_32_coex_sep16_Gammaproteobacteria_Xanthomonadales_66_6

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 1393..2175

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B Tax=Arenimonas oryziterrae RepID=UPI0003B6B7EF similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 261.0
  • Bit_score: 379
  • Evalue 2.60e-102
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 257.0
  • Bit_score: 367
  • Evalue 2.90e-99
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 238.0
  • Bit_score: 384
  • Evalue 6.70e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gammaproteobacteria_63_22 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGAGCAAGCTTCCGCGCACCCAGTTCCGTCCGCTGGACGGCATCCTCTTGCTGGACAAGCCTGCCGGCATCAGTTCGAACCAGGCGCTGCAGCGGGTCCGGCACTTGTTCCGGGCCGAGAAAGCCGGACATACCGGCAGCCTGGATCCCCTGGCCACCGGCTTGCTGCCAGTCTGCTTCGGCGAGGCGACCAAGATCGCCGGTCACCTGCTCGGCAACGCCAAGTCTTATGACACCAGCGCGAAGCTCGGCGTCACCACCGATACCGACGACGCCGATGGCCAGCCGCTCCGCGAGCGGCCGGTTCCTGTTCTCGACCGCGCCCGGGTCGAAGCCGAACTCCGCGCCTTCAAGGGTCGGATCATGCAGCGGCCGCCGATCTATTCCGCGCTCAAGCAGGGTGGGGAGCCGCTATACGCCAAGGCCCGTCGCGGCGAGGCGATCGAAGTCCCGGAGCGCGAAGTCGAGATCCGTTCGGTCGAACTGACCGGCCTGTCGGACAACGAACTGTCGCTTCGCATCACCTGCGGCTCGGGCACCTACGTGCGCAGCATCGTCCGCGACCTCGGCGAGGCCCTGGGCTGTGGAGCGCATGTGCTGAGCCTGCGCCGGCTCTGGGTGGAACCCTTCACCGAGCCGCGCATGCATGGGCTGGATGCGTTGCGAACGCTGGCAGACAGCCAGGGCGAGGCGGCGATTGACGCATTGTTGCTACCTGTTGATGCGGGCCTGTCGGCGTGGCCGACGGTGCGGCTCGACGAACGCCAAGCGGCGGCGCTGGGG
PROTEIN sequence
Length: 261
MSKLPRTQFRPLDGILLLDKPAGISSNQALQRVRHLFRAEKAGHTGSLDPLATGLLPVCFGEATKIAGHLLGNAKSYDTSAKLGVTTDTDDADGQPLRERPVPVLDRARVEAELRAFKGRIMQRPPIYSALKQGGEPLYAKARRGEAIEVPEREVEIRSVELTGLSDNELSLRITCGSGTYVRSIVRDLGEALGCGAHVLSLRRLWVEPFTEPRMHGLDALRTLADSQGEAAIDALLLPVDAGLSAWPTVRLDERQAAALG