ggKbase home page

PLM4_32_coex_redo_sep16_scaffold_178214_2

Organism: PLM4_32_coex_sep16_Gammaproteobacteria_Xanthomonadales_66_6

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 298..1380

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Prevotella ruminicola genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 46.1
  • Coverage: 362.0
  • Bit_score: 344
  • Evalue 7.60e-92
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 354.0
  • Bit_score: 263
  • Evalue 4.80e-68
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 361.0
  • Bit_score: 614
  • Evalue 7.20e-173

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gammaproteobacteria_63_22 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1083
ATGCGGTCCAGGAACTCGGGCACGTGGCTGCCCTCGCTGTGCCTGCTGCTCGCAGCGGGTCCGGCTTCGGCGGATCAGTTCGAACTGGCCCAGCTGCAAACCAAGGAACTGCGCCTGCTCTACCAGGATCCGCAGCAGACCTACCTGACGCCCTACGTGGCGCGCAATTTCCTCAACGCCCTGGACCTCGAGAAGCGGATCTTCCGCTGGACGCCGTACGAGGAAGTTACCGTCGTCCTGACTGACATGTCCGACTACGGCAACGGCCGGGCGCTGGTGGCACCGCAGAACATCATCGCGGCCGAGCTCTCGCCGAGCAGCCACGCCTTCGAAACGATGCCCAGCAACGAGCGATTCCACTCGCTGGCCAGCCACGAGCTGGTGCATATCGCCACCATGGACGCCTGGAACCAGGACGACCGGAAATGGCGGCGCTTCTTCGGCGGCAAGCCGCGGGAGACCGACGAGCATCCGGAAACCATCATCTACAACTACCTGTCCACGCCGCGCAACAGCACGCCGCGCTGGTACACCGAGGGATCGGCGGTGTTCATGGAAACCTGGCTGTCCGGCGGCATCGGCCGGGCCCAGGGCGGCTATGACGAGATGGTGTTCCGGGCGATGGTGCGCGACGACGCGCACTTCTACAGCCCGCTGGGCGTGGTCTCGGCCGGCACGACGGCCGACTTCAACACGATGGCCACCGCCTACCTGTATGGCACCCGCTTCTTCAGTTACCTCTCGATCCAGTACAAGCCCGAGATGGTCGTGGACTGGCTCAGCCGCGGCGAAGAGAGCGACCGCTACTACGGCACCCAGTTCGAGCGGGTATTTGGCAAGACCGTCGAAGCCGCCTGGAGCGACTGGATCGCCTGGGAGCACGAATTCCAGAAGACCAACCTCGCCTCGGTGCGCGCGTTCCCGCTTACCGTCGGCAAGCGGGTCAGCTCGCAGACCTTCGGCTCGATCTCGAAGTCCTACGTCGACCCGTTCAACGACACGATGGTCGGCGCCTTCCTGTACCCGGGCGTGGTCTCGCACGTCGGCACCGTGTCGCTGGCCGACGGCCACGTCGAGCGCCTG
PROTEIN sequence
Length: 361
MRSRNSGTWLPSLCLLLAAGPASADQFELAQLQTKELRLLYQDPQQTYLTPYVARNFLNALDLEKRIFRWTPYEEVTVVLTDMSDYGNGRALVAPQNIIAAELSPSSHAFETMPSNERFHSLASHELVHIATMDAWNQDDRKWRRFFGGKPRETDEHPETIIYNYLSTPRNSTPRWYTEGSAVFMETWLSGGIGRAQGGYDEMVFRAMVRDDAHFYSPLGVVSAGTTADFNTMATAYLYGTRFFSYLSIQYKPEMVVDWLSRGEESDRYYGTQFERVFGKTVEAAWSDWIAWEHEFQKTNLASVRAFPLTVGKRVSSQTFGSISKSYVDPFNDTMVGAFLYPGVVSHVGTVSLADGHVERL