ggKbase home page

PLM4_32_coex_redo_sep16_scaffold_180445_2

Organism: PLM4_32_coex_sep16_Gammaproteobacteria_Xanthomonadales_66_6

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(1230..1370)

Top 3 Functional Annotations

Value Algorithm Source
lytic murein transglycosylase d precursor (murein hydrolase d) protein (EC:3.2.1.-) similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 43.0
  • Bit_score: 56
  • Evalue 1.90e-06
murein transglycosylase Tax=Arenimonas oryziterrae RepID=UPI0003B6E1D1 similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 43.0
  • Bit_score: 61
  • Evalue 2.10e-07
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 46.0
  • Bit_score: 78
  • Evalue 1.80e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gammaproteobacteria_63_22 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 141
GCCGGCGACAGCCTGGCCCAGATCGCCCGCGAACATGGTTGCGAAGTGCGCGTGCTGGCCAGGGAAAACAAGCTGCGCTCCCCGGCCTACATGATCAAACCGGGACAGCGCCTGCGGCTGAAGGGTTGCGACGGCGGCTGA
PROTEIN sequence
Length: 47
AGDSLAQIAREHGCEVRVLARENKLRSPAYMIKPGQRLRLKGCDGG*