ggKbase home page

PLM4_32_coex_redo_sep16_scaffold_268985_1

Organism: PLM4_32_coex_sep16_Gammaproteobacteria_Xanthomonadales_66_6

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 3..1115

Top 3 Functional Annotations

Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 371.0
  • Bit_score: 648
  • Evalue 7.10e-184
DNA-directed RNA polymerase subunit beta'''' Tax=Arenimonas oryziterrae RepID=UPI0003B61F86 similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 371.0
  • Bit_score: 680
  • Evalue 7.80e-193
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 371.0
  • Bit_score: 714
  • Evalue 5.30e-203

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gammaproteobacteria_63_22 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1113
TCGGTGCTCGACCTGACCGGCCGTGAGCGCGAGCGCTACAAGCTGCCCTACGGTGCGGTGATCAACGTCAAGGACGGCGCTTCCATCAAGTCCGGCCAGACCATCGCCAACTGGGATCCGCATAACCATCCGATCGTGTCGGAAGTGACCGGCTTCGTGCGCTTCATCGACTTCGTGGACGGCATCACCGTCATCGAGAAGACCGACGAACTGACCGGCCTGGCCTCGCGCGAGATCACCGATCCGAAGCGTCGTGGCTCGATGGGCAAGGACCTCCGCCCGATCGTCCGCATCGTGGACGCCAAGGGCAAGGACCTGAACATCCCGGGCACCGACCTGCCGGCGCAGTACCTGCTGCCGCCGCGCTCGATCGTTAACCTGCAGGATGGCGCCCCGGTCGGCGTCGGCGACGTGGTCACCAAGGTGCCGCAGGAAGCTTCCAAGACCCGCGACATCACCGGTGGTCTGCCGCGCGTGGCCGACCTGTTCGAAGCACGCAAGCCGAAGGATCCCGCGATCCTGGCCGAGCGCTCGGGCATCGTCAGCTTCGGCAAGGACACCAAGGGCAAGCAGCGCCTGATCATCAAGGATCCGGACGGCAACGAGCACGAGGAGCTGATTCCCAAGTACCGCCAGATCATCGTGTTCGAAGGCGAGCACGTGGAGAAGGGCGAGACCGTGGTGGATGGCGAGCCGAATCCGCAGGACATCCTGCGCCTGCTCGGCGTCGAGCCGTTGGCTGCGTACCTGGTGAAGGAAATCCAGGACGTTTACCGGCTGCAGGGCGTCAAGATCAACGACAAGCACATCGAGACGATTACCCGTCAGATGCTGCGCAAGGTCGAGATCACCGACGCCGGCGATACCCGTTTCATGAGCGGCGAACAGGCCGAGCGGATCCGGGTCATCGAGGAAAACGCAAAGATCGAAATCCGGGGCGGCATCCAGGCCCGGTTCGAGCCGGTGCTGCTTGGCATCACCAAGGCATCGCTGGCGACCGAGTCGTTCATCTCCGCGGCCTCCTTCCAGGAGACCACGCGAGTGCTGACCGAAGCGGCTGTTCGCGGTACTCGCGATTCGCTGCGCGGCCTGAAGGAAAACGTCATCGTCGGC
PROTEIN sequence
Length: 371
SVLDLTGRERERYKLPYGAVINVKDGASIKSGQTIANWDPHNHPIVSEVTGFVRFIDFVDGITVIEKTDELTGLASREITDPKRRGSMGKDLRPIVRIVDAKGKDLNIPGTDLPAQYLLPPRSIVNLQDGAPVGVGDVVTKVPQEASKTRDITGGLPRVADLFEARKPKDPAILAERSGIVSFGKDTKGKQRLIIKDPDGNEHEELIPKYRQIIVFEGEHVEKGETVVDGEPNPQDILRLLGVEPLAAYLVKEIQDVYRLQGVKINDKHIETITRQMLRKVEITDAGDTRFMSGEQAERIRVIEENAKIEIRGGIQARFEPVLLGITKASLATESFISAASFQETTRVLTEAAVRGTRDSLRGLKENVIVG