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PLM4_32_coex_redo_sep16_scaffold_307109_1

Organism: PLM4_32_coex_sep16_Gammaproteobacteria_Xanthomonadales_66_6

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 2..613

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Caldithrix abyssi DSM 13497 RepID=H1XX72_9BACT bin=RAAC39 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=RAAC39 organism_group=Ignavibacteria similarity UNIREF
DB: UNIREF100
  • Identity: 39.7
  • Coverage: 174.0
  • Bit_score: 140
  • Evalue 1.20e-30
RNA polymerase sigma factor SigW similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 183.0
  • Bit_score: 130
  • Evalue 3.60e-28
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 179.0
  • Bit_score: 324
  • Evalue 8.40e-86

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Taxonomy

R_Gammaproteobacteria_63_22 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ACCAGCTGTTCGAGGTCGAACGCCTGGCCTGAGCCGGCGTCTTTCCAACCTTTTTCGCATTCGCAGGTATTGATGACTGACGACCCGGATGCCGCCCTCGTTCTCGAATGCCGGGCAGGCAACCGTCGGGCGTTCGAGCGTTTGCTCGCGCGTTACGAGCGGCCGATTTTCAACGCGGCCTACCGCATCCTCCACCATCGCGAAGACGCCACCGACGTGACCCAGACCGTGTTCCTCCGCGCCTACGAGCACTTCGACCGCTTCGACCCGGGCCAGCGTTTCTTCAGCTGGATCTACCGGATCGCGGTCAACGAGGCCATTGACATGAGCAATGGCCGGCGACCGGCCGAGGCGATCGTTGATGACCTTCCCAGCGACCGTAGCGGCCCGGAACGCAATGCCGAATCCGACCAGATGGACGAAGGCATGCAGAACGCGTTGATGGCGCTGCCCGTGGATTACCGGACCCTGGTCGTGCTCAAGCACGTGCAGGACTGCAGCTACGAGGAGATTGCGGCAATCCTCGAATGCCCGGTCAAGACGGTCAAATCGCGACTTTTCACCGCGCGCCAGGCCTTGCGCCAGGTGCTCGTGTCCCGGGGCCTGGCATGA
PROTEIN sequence
Length: 204
TSCSRSNAWPEPASFQPFSHSQVLMTDDPDAALVLECRAGNRRAFERLLARYERPIFNAAYRILHHREDATDVTQTVFLRAYEHFDRFDPGQRFFSWIYRIAVNEAIDMSNGRRPAEAIVDDLPSDRSGPERNAESDQMDEGMQNALMALPVDYRTLVVLKHVQDCSYEEIAAILECPVKTVKSRLFTARQALRQVLVSRGLA*