ggKbase home page

PLM4_32_coex_redo_sep16_scaffold_28189_3

Organism: PLM4_32_coex_sep16_Deltaproteobacteria_Geobacteraceae_57_7

near complete RP 44 / 55 MC: 4 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: 2996..3403

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 136.0
  • Bit_score: 261
  • Evalue 5.80e-67
Ribonuclease E Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAD1_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 136.0
  • Bit_score: 261
  • Evalue 4.20e-67
ribonuclease similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 136.0
  • Bit_score: 261
  • Evalue 1.20e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGTCAAAAAAGATGCTGATTAACGCTTTGCACCCGGAAGAGGCGCGGGTGGCCATTGTCGAGGACGGCGAACTCGTCGAGCTGGATATCGAGATTGCCGGCCTTGAACAGACCCGCGGCAACATTTACAAGGGGGTGGTGGTCCGGGTCGAGCCGGGACTGCAGGCCGCCTTTGTCGACATCGGCCTGAAAAAGCTCGGATTCCTCCAGATGGGGGAGATTCACCCGGATAACTGGCTCTGGCGGGATGATGTCCCCGAAGATCAGCGACACCGGCGGCCCCGCATCCAGGAGATCCTCCGCCGCAACCAGGAACTCATCGTCCAGGTGGAAAAGGGGGAGCGGGACAACAAGGGGGCTGCGCTGACCACCTACATCTCCCTGCCGGGGCGTTACATGGTGCTCATG
PROTEIN sequence
Length: 136
MSKKMLINALHPEEARVAIVEDGELVELDIEIAGLEQTRGNIYKGVVVRVEPGLQAAFVDIGLKKLGFLQMGEIHPDNWLWRDDVPEDQRHRRPRIQEILRRNQELIVQVEKGERDNKGAALTTYISLPGRYMVLM