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PLM3-1_200_b1_sep16_scaffold_1768_1

Organism: PLM6_200_b1_sep16_Methylomirabilis_oxyfera_62_13

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(2..580)

Top 3 Functional Annotations

Value Algorithm Source
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 193.0
  • Bit_score: 336
  • Evalue 3.10e-90
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:CBE67609.1};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 193.0
  • Bit_score: 336
  • Evalue 1.50e-89
DNA-directed RNA polymerase subunit beta' Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK26_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 193.0
  • Bit_score: 336
  • Evalue 1.10e-89

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Taxonomy

Candidatus Methylomirabilis oxyfera → Candidatus Methylomirabilis → Bacteria

Sequences

DNA sequence
Length: 579
TTGGAGGAGGTGATCCGCGAACACCCGATCCTCCTGAACCGCGCCCCGACCTTGCATCGCCTCGGCGTCCAAGCCTTTGAGCCCGTCCTTGTTGAGGGGGAAGCGATAAAGATCCATCCCCTGGTCTGCGCCGCGTTCAACGCCGACTTCGATGGTGACCAGATGGCGGTACATGTCCCCCTCTCTCCGGAGGCCCAGCTCGAGGCCTCCGTTCTGATGCTGGCTCCCTACAACATCCTCTCCCCGGCCAACGGGGCCCCCATCGCTGCGCCCAGCCAGGACATCGTGCTTGGCTGTTACTACTTGACACGAGTGAAGATTGGTGAGAAAGGCGAGGGCCGGGGGGTCTTCTCCGATCCGGACGAGGTTCGAGCCGCCTACGACGCCGAGGAGGTGGGCCTTCTGGCTTCGATCAAGGTGCGGATCGATGGGGAGATGACTGAAACCACCGTCGGGCGATGTATCTTCAATGAGCACCTCCCCGAGAGTCTCCGCTTCATCAACCAGGAGATGAACCGACGGGAGCTCACTCGTCTTGTCGCTCAGTGCCACTATGTCCTCGGGAATGCAGAAACCGTG
PROTEIN sequence
Length: 193
LEEVIREHPILLNRAPTLHRLGVQAFEPVLVEGEAIKIHPLVCAAFNADFDGDQMAVHVPLSPEAQLEASVLMLAPYNILSPANGAPIAAPSQDIVLGCYYLTRVKIGEKGEGRGVFSDPDEVRAAYDAEEVGLLASIKVRIDGEMTETTVGRCIFNEHLPESLRFINQEMNRRELTRLVAQCHYVLGNAETV