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PLM3-1_200_b1_sep16_scaffold_1768_3

Organism: PLM6_200_b1_sep16_Methylomirabilis_oxyfera_62_13

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(1916..5932)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoB; RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 1338.0
  • Bit_score: 2288
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CBE67608.1};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 1338.0
  • Bit_score: 2288
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK25_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 1338.0
  • Bit_score: 2288
  • Evalue 0.0

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Taxonomy

Candidatus Methylomirabilis oxyfera → Candidatus Methylomirabilis → Bacteria

Sequences

DNA sequence
Length: 4017
ATGGCTCTGGCCAAGAAGAGCGGGGCTGCTGAGCGGAGCAGTTTCGCCAAGATCAAAGAGATCATTCCGATTCCCAATCTGATTGAAGTCCAGCGGCGGTCCTTCGATCAGTTCCTTCAGATGAAGGTCTCTCCCCACGCGCGCGAGGAAATCGGGCTTCAAGGGGTCTTTACCAGCATCTTCCCGATTTTCGACTACGACGACTCGGCGTCGCTGGAGTTCGTGAAATTCGAGTTCGGGTCGCCCAAGTACAGTGCCGAGGAATGTCGCGAAAAAGGCATGACGTTCTCCGTTCCTCTCAAGGTGACACTCCGTTTGGTGGTCTGGGACAAACAGGCCGACTCCGAGGCCAGGAGCATCCGGGATATTAAGGAGCAAGAGGTCTACCTCGGAGAGATGCCTGTGATGACGGCGCATGGCACCTTCATCATCAACGGCACGGAGCGCGTCGTGGTCAGTCAGCTTCACCGGTCCCCGGGGGTGTTCTTCGACCATGATGGGGGCAAGACCCACCCAAGCGGGAAGACCCTCTACTCGGCCCGACTGATCCCGTATCGAGGCTCTTGGCTGGAATTCGATTTCGATGGGAGCGACGTGCTTCATGTCCGGGTGGACCGACGACGGAAGTTTCTGGCAACGATCCTGTTGCGGGCCATCGGGTACAGCAGCAATGAGCAGATTCTGAGCCTCTTCTATGAGCGGGATGTCATTCACGTCCAGAAGGGGAAGGAGCTGCTGATCGGTGTGAACTCGCCCGGCGCCACCAGCTTTCGAGTCAGCAGGGACATCTCTGACCCTCACTCGAGACAGCCGATTGTCGGGGCGACCAAGCGGATCACGAAGGCGGCCCAGAAGCGGTTGCAGGCCTTGAAGGTCGCACACGTACCCCTCTACAAGGAAGATGTCATTGGCCGGATCGCGGCCGCAGATATCGTGAATCCGAAGACCGGTGAAGTGATCTTGGAATGCGCGCATGAGATCACGGAAGACTCGCTTGAGCAGATTCTGAAAAGCGGGATTCGAGACCTCGCGGTGCTTTCCAGCCACGATGGCCGGGAGGTGTTCGACATTCGGGAGACCATCCTCCGTGACTCGACCCGCTCCGAGAAGGAGGCGCTGACGGAGATTTACCGAAGAATGCGGCCGGGCGATCCGCCTAACGAGGAAGCGACCAAGGCGTTCCTGGAGTCCATCTTCTTTAACTCGCGGCGCTACGATCTCTCCAAGGTCGGCCGCCTGAAGATAAATCGCAAGCTAGGGATGGACGTGCCCCTCGAGGCCCGCACCCTCATCAGCCGCCGGTATCGGCCCGCTGGAATGGAGGGGCGGGCTGCCAATGTGGACGATATCGTGGGGCTGATCCGCTACCTCCTCCGGCTGAAGCATGGAGAACCCGGCACCTCCATTGATGATATCGACCATCTGGGCAATCGGCGGGTCCGGTCGGCTGGAGAGCTTCTGGAGGACCAGTTCAGGATCGGGTTGGCTCGGATGGAGCGGGCGGTCCGAGAGCGAATGAGCACGCAGGAGCTTGAGACCCTCATGCCGCACGACTTGGTGAATGCCAAGCCGGTCACAGCCGCCTTGAAGGAGTTTTTCGGCAGCTCCCAGCTCTCACAGTTCATGGATCAGACGAACCCGCTGGCCGAACTGACCCATAAGCGGCGACTGTCGGCCTTGGGTCCCGGAGGCCTGTCCAGGGAGCGGGCGGGGTTCGAGGTCCGGGACGTACACCCAACCCACTATGGCCGGGTGTGTCCGATCGAGACCCCAGAGGGCCCCAATGTTGGTCTCATCGCCAGCCTCTCGACCTACGCCCGCGTCAATGATTTTGGATTTATCGAGACCCCCTATCGCAAGGCGAAGGACGGGGTGGTGTCCGACGAGATCGAGTACTTGACGGCCGATGAAGAGGAGAAGTACACCATCGCACAGGCCAACGCGGAACTGGACGCGCGGGGGCGCCTCACCTCGGATCGGGTCTCGTCACGATCTGGGGGAAACTTTGTCATGGTCCCCCCGAATAAGATCGATTACATGGATGTGTCCCCGAAGCAACTGGTCGGGGTCTCGACGTCCCTGATCCCCTTCCTGGAGCATGATGACGCCAACCGGGCGCTCATGGGGGCCAACATGCAGCGTCAGGCGGTTCCCCTCTTGCGACCGGAGGCCCCACTGGTTGGGACCGGAATGGAGCATGCCGCGGCCAAGGATTCAGGGGCGGTTGTGGTGGCCAGGCGTGGCGGGGTGGTCGAGTCGGTAAGCACCGAGCGGATCATCGTCCGTGCCTCGGATGGCAAGGGAGAAGATGGAAGCGACGCCTCCGGGGTGGACGTCTATACGCTCGTGAAGTTCCGCCGCAGCAACCAGAACACCTGCATCAACCAGCGGCCGATCGTCAAGAAGGGTGAACGGATCGCGAGGGAGCAAGTCATCGCGGATGGACCTGCCACCCAGCTCGGCGAGCTGGCCCTTGGGCAGAACGTTCTGGTCGCCTTCATGCCATGGGGTGGGTATAACTTTGAGGACGCCATCCTGATTAGCGAACGGTTGGTCAAGGATGACCGTTACACCTCCATCCATATCGAGGAGTTTGAGATCGAGGCTCGCGACACCAAGTTGGGGAAGGAGGAGATCACACGCGATACGCCCAACGTGGGTGAGGACGCCCTGAAGGATCTCGACGAAAGCGGGATCATTCGGATTGGAGCCGAGGTGAGGCCTGGCGACATCCTGGTGGGGAAGGTGACCCCCAAAGGGGAAACCGTGTTGACCCCTGAGGAGCGGCTGTTGCGTGCCATCTTCGGCGAGAAGGCCGAGGATGTCCGGGACGCCTCCCTCTATGTCCCGCCGGGAATCAATGGGACCGTGGTCGATGTGAAGGTGTTTTCGCGGAAGGGAATCGAGAAGGACGAGCGGGCCAAATCGATCGAGGACGAAGAGGTCAGCCGACTTCGCAAGGACTTTGACGACGAGATCAGCATCATTGCCGCAGAGCGTGATAGGAAGCTGCGCGCCCTCCTTGAGGGCAGGTCGGCAGCCAAGGAGGTCCGAAGCAAGAGGACGCGCAAGGTCATTGCGGCAAAGGGCAAGAAGCTAACCGGCGAGACGCTGGACAAGCTTTCGCATGAGGATCTGGTGGAGCTTGCAGGCCGATTGAACGACGAGTTAGGCCGGAAAGCGACCAAGATTAGCGATGCCGCCGACAACCAGATCCATGTCCTCCAAACGCTCTTGGAAGAGCGGATCGGCCGGGTGACACGGGGGGACGAGCTCGCCCCCGGCGTCTTCAAGATGGTCAAGCTCTACGTAGCCATGAAGCGAAAGCTTTCCGTCGGCGACAAGGTTGCTGGCCGCCACGGCAACAAGGGGGTCATCGCCAAGATCCTTCCAGAAGAGGACATGCCCTATCTGCCGGACGGCACCCCTGTCGAGGTGGTCCTGAATCCTCTGGGTGTCCCGTCCCGGATGAACGTGGGCCAGATCCTGGAGACCCATCTGGGGTGGGCCGCGCAGGTCCTCGGGATCCGAGTTGCCTCCCCGGTCTTCGATGGAGCGACCGAAAAAGAGATCAAGGGCTGGCTGAAGCGCGCTAAGCTGCCCGTCACAGGGAAGACGGTGTTGTATGACGGACGGACAGGGAAGCCGTTCCATCAGGAGGTGACGGTCGGCTATATCTATCTCATGAAGCTGGCCCATCTGGTGGATGACAAGATCCACGCGCGCTCCATCGGTCCCTACTCATTGGTCACTCAACAGCCGCTGGGTGGGAAGGCCCAATTCGGCGGGCAGCGCTTCGGGGAGATGGAGGTGTGGGCCTTGGAGGCTTACGGGGCCGCGTATACGCTTCAGGAGATCCTCACCGTGAAGTCGGACGACGTGGTCGGGCGAACCAAGATGTACGAGTCGATCGTCAAAGGCGACTGCGCTCTCGAGCCAGGGCTGCCGGAGTCCTTCAACGTCCTGGTGAAAGAGTTACAAAGCTTGTCGCTGGATGTGGAGTTGAAGAAAGAGTAG
PROTEIN sequence
Length: 1339
MALAKKSGAAERSSFAKIKEIIPIPNLIEVQRRSFDQFLQMKVSPHAREEIGLQGVFTSIFPIFDYDDSASLEFVKFEFGSPKYSAEECREKGMTFSVPLKVTLRLVVWDKQADSEARSIRDIKEQEVYLGEMPVMTAHGTFIINGTERVVVSQLHRSPGVFFDHDGGKTHPSGKTLYSARLIPYRGSWLEFDFDGSDVLHVRVDRRRKFLATILLRAIGYSSNEQILSLFYERDVIHVQKGKELLIGVNSPGATSFRVSRDISDPHSRQPIVGATKRITKAAQKRLQALKVAHVPLYKEDVIGRIAAADIVNPKTGEVILECAHEITEDSLEQILKSGIRDLAVLSSHDGREVFDIRETILRDSTRSEKEALTEIYRRMRPGDPPNEEATKAFLESIFFNSRRYDLSKVGRLKINRKLGMDVPLEARTLISRRYRPAGMEGRAANVDDIVGLIRYLLRLKHGEPGTSIDDIDHLGNRRVRSAGELLEDQFRIGLARMERAVRERMSTQELETLMPHDLVNAKPVTAALKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLSRERAGFEVRDVHPTHYGRVCPIETPEGPNVGLIASLSTYARVNDFGFIETPYRKAKDGVVSDEIEYLTADEEEKYTIAQANAELDARGRLTSDRVSSRSGGNFVMVPPNKIDYMDVSPKQLVGVSTSLIPFLEHDDANRALMGANMQRQAVPLLRPEAPLVGTGMEHAAAKDSGAVVVARRGGVVESVSTERIIVRASDGKGEDGSDASGVDVYTLVKFRRSNQNTCINQRPIVKKGERIAREQVIADGPATQLGELALGQNVLVAFMPWGGYNFEDAILISERLVKDDRYTSIHIEEFEIEARDTKLGKEEITRDTPNVGEDALKDLDESGIIRIGAEVRPGDILVGKVTPKGETVLTPEERLLRAIFGEKAEDVRDASLYVPPGINGTVVDVKVFSRKGIEKDERAKSIEDEEVSRLRKDFDDEISIIAAERDRKLRALLEGRSAAKEVRSKRTRKVIAAKGKKLTGETLDKLSHEDLVELAGRLNDELGRKATKISDAADNQIHVLQTLLEERIGRVTRGDELAPGVFKMVKLYVAMKRKLSVGDKVAGRHGNKGVIAKILPEEDMPYLPDGTPVEVVLNPLGVPSRMNVGQILETHLGWAAQVLGIRVASPVFDGATEKEIKGWLKRAKLPVTGKTVLYDGRTGKPFHQEVTVGYIYLMKLAHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTVKSDDVVGRTKMYESIVKGDCALEPGLPESFNVLVKELQSLSLDVELKKE*