ggKbase home page

PLM3-1_200_b1_sep16_scaffold_14939_3

Organism: PLM6_200_b1_sep16_Deltaproteobacteria_56_19

near complete RP 42 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 13 / 38 MC: 2
Location: comp(1992..3143)

Top 3 Functional Annotations

Value Algorithm Source
short-chain specific acyl-CoA dehydrogenase (EC:1.3.99.-) similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 385.0
  • Bit_score: 459
  • Evalue 4.90e-127
Acyl-CoA dehydrogenase, short-chain specific bin=GWD2_Deltaproteobacteria_55_8 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 383.0
  • Bit_score: 606
  • Evalue 1.50e-170
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 383.0
  • Bit_score: 636
  • Evalue 1.90e-179

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1152
ATGGATTTCGATCTATCCGACGAGTTGATAGCGGCGCGTGACCTGGCGCGGGATTTTGCCGAAAAAGAGATCGCTCCCACCGCAGCCAAAGACGACAGGGAGCGCACCTTCCGCAGAGAGCTGGTGCGGAAGATGGGCGAATTGGGTTTTTATGGCTGCGTTATTCCAGAGGCCTACGGAGGGAGCGATCTGGGGTTTCTCGCCCTCGTCCTGGTCACGGAAGAGATTGCCCGTGTTCACAGCGCCATGCGGGTCTTTATCAATATGCAGGTCGGTCCGGCCCTCGCCCTCCTTGAATTCGGCGCCGAGAAGCAAAAGAAAGAATGGATACCGCCTCTGATCCGAGGCGAAACCCTTAGCTGTTTTGCCATTACCGAGCCTGACGCGGGGTCGGACGTGGCGGCGATGAGAACCACCGCTGTCCGAAAAGAGGACGGCTATGTCCTTAACGGAACCAAGATCTGGATCTCCAATGCCCCGGTCGCCGACACCGCTCTCATCTACGCTTACACGAACCGATCCCAAAAGCATCACGGCCTTTCCGCCTTTTACGTGGATCTCAATCGGCCCGGCCTGAGCCGCAGGCGGCTCGAGACCATGGGAGCGCATGCGTCTCCTGTAGGAGAGCTTACGTTTGATAACTGCCGAATCCCAGCGACAAGCCTGATCGGCAAAGAGGGAGACGGGTTCAAGATCTGCATGTGGCAATTGAACCAGACGCGCCTGAGCTGTGCCGCCGGTGCGGTCGGTCTGGCACGGGCCGCCAGGGAAGCGGCCGTCAGCTACGCCAACCAGAGGGAGCAGTTCGGCCAGAAGATCGGTCAATTTCAAATGATCCAGGATCTCATCGCCCAGATGGTCGTCCACGAGGAGTCGGCCCGCCTTCTGGCATATCGCGCCGCCTGTCTGGCGGATCGCAGGCAGGCCAACAATCTGGAGGTTTCGATGGCCAAGTATGCGGCCGCCGAGGCTGCCGCCTTTGCCTCAGATGCCGCCCTAAAAATCCTGGGGGCGTACGGCTACTCCACCGAATTCCCCGTTGAGCGCTATTTCCGGGACGCCAAGTCCTACCAGATCGTCGAGGGCTCTTCGAACATCCAAAAGCTCATCATCGCCCAGGACGTTCTAGGCTATAGAAAGGCGAATCGATGA
PROTEIN sequence
Length: 384
MDFDLSDELIAARDLARDFAEKEIAPTAAKDDRERTFRRELVRKMGELGFYGCVIPEAYGGSDLGFLALVLVTEEIARVHSAMRVFINMQVGPALALLEFGAEKQKKEWIPPLIRGETLSCFAITEPDAGSDVAAMRTTAVRKEDGYVLNGTKIWISNAPVADTALIYAYTNRSQKHHGLSAFYVDLNRPGLSRRRLETMGAHASPVGELTFDNCRIPATSLIGKEGDGFKICMWQLNQTRLSCAAGAVGLARAAREAAVSYANQREQFGQKIGQFQMIQDLIAQMVVHEESARLLAYRAACLADRRQANNLEVSMAKYAAAEAAAFASDAALKILGAYGYSTEFPVERYFRDAKSYQIVEGSSNIQKLIIAQDVLGYRKANR*