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PLM3_127_b2_sep16_scaffold_1209_19

Organism: PLM3_127_b2_sep16_Rokubacteria_69_9

near complete RP 51 / 55 MC: 3 BSCG 50 / 51 ASCG 12 / 38 MC: 1
Location: comp(25218..25805)

Top 3 Functional Annotations

Value Algorithm Source
lipopolysaccharide transport periplasmic protein LptA; K09774 lipopolysaccharide export system protein LptA bin=bin7_NC10_sister species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 201.0
  • Bit_score: 203
  • Evalue 1.90e-49
OstA-like protein similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 194.0
  • Bit_score: 101
  • Evalue 1.70e-19
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 190.0
  • Bit_score: 225
  • Evalue 3.90e-56

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Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 588
GTGACGGTTTGGGACCGATCGACCGTGGTCCTGGTCATGCTTGCCGCAGCCGCGAGCCTGATGGCCGGACCAACCGCCGCCCAGGCACCGGGGGGAGCGGCCCGGCCACCGGCCGCCAAGAAGCCGGAGGAGCGCAGCCAGCCGGTGACCGTCGACGCCGACAAGATGGAGCGCTTCGGCAAGGAAAACCTGGTGGTCTTCACGGGCAACGTGGTGGCACGCCAGGACGGCTCCGTGCAGTACACGGATCGCATGGAGGTGTACCTGGATGAGCGCGGTGACCGGATCCTGCGCACCGTGTCCACGGGCAACGTGAAGGTCGTCACCAAGGACTGTCGGTTCGGCACCGGCCAACGCGCGGAGTACTTCGAGCCGCAGAAGCTTGTCCGCCTCATCGGCAACGCCAGGGTCTGGCAGGACGACAACGTGGTCACGGGAGACACCATCGACTTTTACATGTCCGAGGACCGGGCCGTGGTGGAGGCCGGCAAGCAAGGACGCGTGAAGGCGCAATTCTTCCCCAGGGACGAGGGGCGGCCGGGCGCGGACGGGGCGGCAGCCAAGACCTCGACGCCCTGCCAGAACTGA
PROTEIN sequence
Length: 196
VTVWDRSTVVLVMLAAAASLMAGPTAAQAPGGAARPPAAKKPEERSQPVTVDADKMERFGKENLVVFTGNVVARQDGSVQYTDRMEVYLDERGDRILRTVSTGNVKVVTKDCRFGTGQRAEYFEPQKLVRLIGNARVWQDDNVVTGDTIDFYMSEDRAVVEAGKQGRVKAQFFPRDEGRPGADGAAAKTSTPCQN*