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PLM3_127_b2_sep16_scaffold_4596_10

Organism: PLM3_127_b2_sep16_Rokubacteria_69_9

near complete RP 51 / 55 MC: 3 BSCG 50 / 51 ASCG 12 / 38 MC: 1
Location: comp(7227..8654)

Top 3 Functional Annotations

Value Algorithm Source
Putative Nitrogen assimilation transcription regulatory protein (NtrC)(Synonyms:glnT, glnG) bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 471.0
  • Bit_score: 752
  • Evalue 1.60e-214
gnfM; nitrogen fixation master sigma-54-dependent transcriptional response regulator similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 473.0
  • Bit_score: 495
  • Evalue 9.90e-138
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 472.0
  • Bit_score: 814
  • Evalue 6.20e-233

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1428
ATGACCGCGCGCATCCTCATCGCCGACGACGAAGATAGCCTGCGCTGGGTGCTGGACAAGGGTCTGCGTGGAGCGGGCTATGAGGCGGTCACCGTAGGCGACGGCGAGAGCGCCATCCGCACCTTCGAAGCGGAGCCGTTCGATCTTGTCTTCCTCGACGTCCGCATGCCGGGCCTGGACGGTCTGACCGTGCTCGACAAGATCCGCGAGCTGCGGCCCGACGCCAGCGTGGTGGTCATGACTGCGCACGGCACCATGGACACGGCCATCCAGGCCATGCAGCGCGGGGCCTACGATTACCTCGCCAAGCCCTTCGATCTCGACGCCGCGCTCCTGCTCGTGGAGCGCGCGCTGGCCGCGAGCCGCCTCACCCAGGAGGTGGCGCGGCTGCGCACCGGGCTCAAGGAAGTCTGGGAGTTCGGCGCCCTCATCGGCCGGCACCCGCGGATGCAGGAGGTGTACAAGACCATCGGACGGGTAGCCTCCAGCGACGTCACCGTGCTCTTGCGAGGAGAGTCGGGCACGGGCAAGGAGCTGGTGGCGCGCGCCATCCACCACTACAGCCGGCGCGCCGGGCGTCCGTTCATCGCCGTCTCCGCCGCGGCGATCCCCGGCACCTTGCTGGAGTCCGAATTGTTCGGCCACGAGCGCGGCGCGTTCACCGACGCCAAGGAGCGGCGCCTGGGCAAGCTCGAGCTGGCTCACGGGGGGACGCTGTTTCTCGACGAGATCGGCGACATGCCCGTGGATCTCCAGACCAAGATGCTGCGCGCGCTCCAGGAGCGGACCATCGAGCGCGTGGGTGGACAGGAGTCGATTCGCATCGACGTGCGCGTGCTCGCCGCCACCAACCGGGACCTCGAGGCCCTCATGAAGGAGGGCAAGTTTCGCGAGGACCTCTACTACCGGCTGAACGTGGTGACCCTGAATCTGCCGTCGCTGCGCGAGCGGCGCCGGGACGTTCCGCTCCTCGTGGAGCATTTCCTGGCCAAACACGCCGGAGAACTCGGGGAGCGCGCGGTGGCGCCGGAGGCGCTCGACCGGCTGGTCGGCTACGACTGGCCGGGGAACGTGCGGGAGCTGGAAAACGTCGTCCAGCGCGCCATGGTGATGGCCACCAACGGCGTCGTCCTCCCCGAGCATCTGCCCATCGGGCCGGTGTCCGCGGCGGCGTCCGTGGCCGTGGACGCCACCCTGGAGGACATCATCGAGCGCAAGCTCGTGCAGTGCGTGAGTGGCCTCCGGGAGCAGGCCAGCGCCAACCTCTATGACCTGATCGTCGGGCTGGTGGAGAAGCCGCTGTTGCGAGCCGTGCTGCGCGAGACGCGCGGCAATCAGGTGCGCGCGGCGCAGATCCTCGGCATCAACCGCAACACCCTCCGCAAGAAGCTCAACGAGCACGGGATCGACCCCGACACTCTCGAGTAG
PROTEIN sequence
Length: 476
MTARILIADDEDSLRWVLDKGLRGAGYEAVTVGDGESAIRTFEAEPFDLVFLDVRMPGLDGLTVLDKIRELRPDASVVVMTAHGTMDTAIQAMQRGAYDYLAKPFDLDAALLLVERALAASRLTQEVARLRTGLKEVWEFGALIGRHPRMQEVYKTIGRVASSDVTVLLRGESGTGKELVARAIHHYSRRAGRPFIAVSAAAIPGTLLESELFGHERGAFTDAKERRLGKLELAHGGTLFLDEIGDMPVDLQTKMLRALQERTIERVGGQESIRIDVRVLAATNRDLEALMKEGKFREDLYYRLNVVTLNLPSLRERRRDVPLLVEHFLAKHAGELGERAVAPEALDRLVGYDWPGNVRELENVVQRAMVMATNGVVLPEHLPIGPVSAAASVAVDATLEDIIERKLVQCVSGLREQASANLYDLIVGLVEKPLLRAVLRETRGNQVRAAQILGINRNTLRKKLNEHGIDPDTLE*