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PLM3_127_b2_sep16_scaffold_2047

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2047_1
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..691
DNA (690bp) protein (230aa)
ABC-type branched-chain amino acid transport system, ATPase component Tax=Variovorax sp. CF313 RepID=J3CHS5_9BURK
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJL71666.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative branched-chain amino acid ABC transporter, ATP-binding protein
PLM3_127_b2_sep16_scaffold_2047_2
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1025..1903
DNA (879bp) protein (293aa)
Branched-chain amino acid ABC-type transport system, permease component Tax=Variovorax sp. CF313 RepID=J2JUY3_9BURK
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:EJL71665.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative branched-chain amino acid ABC transporter, permease protein
PLM3_127_b2_sep16_scaffold_2047_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2105..3136
DNA (1032bp) protein (344aa)
ABC-type branched-chain amino acid transport system, permease component Tax=Variovorax sp. CF313 RepID=J3CHF0_9BURK
Variovorax paradoxus strain MEDvA23 contig_99, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ20098.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
inner-membrane translocator
PLM3_127_b2_sep16_scaffold_2047_4
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3146..4348
DNA (1203bp) protein (401aa)
beta-ketoadipyl CoA thiolase (EC:2.3.1.174)
Beta-ketoadipyl CoA thiolase {ECO:0000313|EMBL:ADG17516.1}; EC=2.3.1.174 {ECO:0000313|EMBL:ADG17516.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1002).;"
acetyl-CoA acetyltransferase Tax=Burkholderia kururiensis RepID=UPI00034A2DAB
PLM3_127_b2_sep16_scaffold_2047_5
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4592..5446
DNA (855bp) protein (285aa)
Hydroxyquinol 1,2-dioxygenase (1,2-HQD) {ECO:0000313|EMBL:CCE06257.1}; EC=1.13.11.37 {ECO:0000313|EMBL:CCE06257.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
Hydroxyquinol 1,2-dioxygenase (1,2-HQD) Tax=Bradyrhizobium sp. STM 3843 RepID=H0TIG9_9BRAD
putative hydroxyquinol 1,2-dioxygenase
PLM3_127_b2_sep16_scaffold_2047_6
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5446..5832
DNA (387bp) protein (129aa)
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase Tax=Burkholderia sp. BT03 RepID=J2S8K2_9BURK
4-nitrocatechol monooxygenase ferridoxin protein {ECO:0000313|EMBL:EIM94620.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
putative iron-sulfur cluster-binding protein Rieske family
PLM3_127_b2_sep16_scaffold_2047_7
Pseudomonas sp. ES3-33, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6040..6351)
DNA (312bp) protein (104aa)
PsiF repeat containing protein Tax=Pseudomonas RepID=J2QWI5_9PSED
Phosphate starvation-inducible protein PsiF {ECO:0000313|EMBL:KJH75980.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. ES3-33.;"
hypothetical secreted protein
PLM3_127_b2_sep16_scaffold_2047_8
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6414..7751)
DNA (1338bp) protein (446aa)
hypothetical protein Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI00037EA5E0
Uncharacterized protein {ECO:0000313|EMBL:KIL40466.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_2047_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7763..9046)
DNA (1284bp) protein (428aa)
Uncharacterized protein Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A9Y7_STAND
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_2047_10
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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9144..9869
DNA (726bp) protein (242aa)
Tax=BJP_IG2102_Gammaproteobacteria_62_140
PLM3_127_b2_sep16_scaffold_2047_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9866..11245)
DNA (1380bp) protein (460aa)
Chromate transporter, chromate ion transporter (CHR) family Tax=Methylobacter tundripaludum SV96 RepID=G3IX05_9GAMM
chrA; CHR transporter
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_2047_12
unknown

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11568..11759
DNA (192bp) protein (64aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2047_13
Pseudomonas sp. HPB0071, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11735..12415
DNA (681bp) protein (227aa)
Uncharacterized protein Tax=Pseudomonas sp. HPB0071 RepID=N2JAJ3_9PSED
Uncharacterized protein {ECO:0000313|EMBL:ENA36612.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. HPB0071.;"
putative carboxypeptidase
PLM3_127_b2_sep16_scaffold_2047_14
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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12880..13182
DNA (303bp) protein (101aa)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI00037174E7
hypothetical protein
Tax=BJP_IG2103_Rhodocyclales_63_50
PLM3_127_b2_sep16_scaffold_2047_15
unknown

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comp(13210..13383)
DNA (174bp) protein (58aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2047_trna_1
unknown

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13522..13603
DNA (82bp)
transferRNA Tyr
PLM3_127_b2_sep16_scaffold_2047_trna_2
unknown

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13704..13774
DNA (71bp)
transferRNA Gly
PLM3_127_b2_sep16_scaffold_2047_trna_3
unknown

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13854..13925
DNA (72bp)
transferRNA Thr
PLM3_127_b2_sep16_scaffold_2047_16
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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13994..14188
DNA (195bp) protein (65aa)
tuf2; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu Tax=Methylovorus RepID=C6X8R6_METSD
Tax=RBG_16_Betaproteobacteria_58_11_curated
Displaying 19 items

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