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PLM3_127_b2_sep16_scaffold_1912

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1912_1
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1170)
DNA (1170bp) protein (390aa)
Sarcosine dehydrogenase Tax=Osedax symbiont Rs2 RepID=S6GFN7_9GAMM
Sarcosine dehydrogenase {ECO:0000313|EMBL:EPJ43289.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont Rs2.;"
glycine cleavage system T protein
PLM3_127_b2_sep16_scaffold_1912_2
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1167..2054)
DNA (888bp) protein (296aa)
Putative ethanolamine kinase protein Tax=Rhizobium etli (strain CIAT 652) RepID=B3PWM0_RHIE6
choline/ethanolamine kinase protein
Choline/ethanolamine kinase protein {ECO:0000313|EMBL:AJC77361.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
PLM3_127_b2_sep16_scaffold_1912_3
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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2263..2487
DNA (225bp) protein (75aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=T1BZ50_9ZZZZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP48403.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
PLM3_127_b2_sep16_scaffold_1912_4
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2645..4177)
DNA (1533bp) protein (511aa)
Amino acid permease-associated region Tax=Sinorhizobium fredii USDA 257 RepID=I3X5U0_RHIFR
amino acid permease
Amino acid permease-associated region {ECO:0000313|EMBL:AFL51246.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
PLM3_127_b2_sep16_scaffold_1912_5
RLO_RIF02_62_27, RIF2, Bacteria

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4383..5123
DNA (741bp) protein (247aa)
hypothetical protein Tax=Pseudanabaena sp. PCC 6802 RepID=UPI0003469D30
peptidase C26
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
PLM3_127_b2_sep16_scaffold_1912_6
unknown

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5433..5783
DNA (351bp) protein (117aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1912_7
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5788..6234
DNA (447bp) protein (149aa)
Glutaredoxin NrdH-like protein Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KJ76_SIMAS
glutaredoxin NrdH-like protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM3_127_b2_sep16_scaffold_1912_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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6363..8012
DNA (1650bp) protein (550aa)
Folate transporter 3 Tax=Nitrosospira sp. APG3 RepID=M5DKB8_9PROT
Membrane protein {ECO:0000313|EMBL:KIO50098.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1912_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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8133..8594
DNA (462bp) protein (154aa)
Conserved hypothetical membrane protein Tax=Azoarcus sp. (strain BH72) RepID=A1K8R8_AZOSB
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_1912_10
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8760..9263
DNA (504bp) protein (168aa)
Acetyltransferase, GNAT family protein Tax=Nitrococcus mobilis Nb-231 RepID=A4BMR5_9GAMM
ribosomal-protein-alanine acetyltransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_1912_11
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9526..11436
DNA (1911bp) protein (637aa)
fcs2; feruloyl-CoA synthase (EC:6.2.1.-)
feruloyl-CoA synthase Tax=Halomonas sp. KM-1 RepID=UPI000289EF78
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
PLM3_127_b2_sep16_scaffold_1912_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11660..12964)
DNA (1305bp) protein (435aa)
Large permease bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
dctQ; large permease
Tax=GWE1_Burkholderiales_65_30_curated
PLM3_127_b2_sep16_scaffold_1912_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12972..13433)
DNA (462bp) protein (154aa)
TrapT family, DctQ subunit C4-dicarboxylate transport Tax=Variovorax paradoxus (strain S110) RepID=C5CVM5_VARPS
TRAP dicarboxylate transporter subunit DctQ
TrapT family, DctQ subunit C4-dicarboxylate transport {ECO:0000313|EMBL:ACS20528.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
PLM3_127_b2_sep16_scaffold_1912_14
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13454..14575)
DNA (1122bp) protein (374aa)
TRAP-type C4-dicarboxylate transport system, periplasmic component bin=GWC2_Methylomirabilis_70_16 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
substrate-binding protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
Displaying 14 items

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