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PLM3_127_b2_sep16_scaffold_135

Search features with annotation key words

Displaying items 61-90 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_135_61
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63940..64164)
DNA (225bp) protein (75aa)
Uncharacterized protein Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6T0_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75541.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
PLM3_127_b2_sep16_scaffold_135_62
unknown

Not on your lists

comp(64247..64384)
DNA (138bp) protein (46aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_135_63
Pseudomonas sp. UW4, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64483..64914)
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Pseudomonas sp. UW4 RepID=K9NL45_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY20781.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. UW4.;"
PLM3_127_b2_sep16_scaffold_135_64
uncultured planctomycete, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(65001..66236)
DNA (1236bp) protein (412aa)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI0003718250
Oxidoreductase {ECO:0000313|EMBL:BAL54266.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
oxidoreductase domain-containing protein
PLM3_127_b2_sep16_scaffold_135_65
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66439..67722)
DNA (1284bp) protein (428aa)
Putative oxidoreductase Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZRF7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETX03348.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_135_66
unknown

Not on your lists

68002..68787
DNA (786bp) protein (262aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_135_67
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68945..70255)
DNA (1311bp) protein (437aa)
magnesium transporter Tax=Nevskia ramosa RepID=UPI0003B43CA0
Mg2+/Co2+ transporter
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_135_68
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70252..71100)
DNA (849bp) protein (283aa)
hypothetical protein Tax=Nevskia ramosa RepID=UPI0003B72CD2
Mg2+ transporter MgtE
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_135_69
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71093..71923)
DNA (831bp) protein (277aa)
hypothetical protein Tax=Nevskia ramosa RepID=UPI0003B3B673
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_135_70
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72387..74072)
DNA (1686bp) protein (562aa)
Putative thiamine pyrophosphate-requiring enzyme Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZFL3_9BRAD
putative thiamine pyrophosphate-requiring enzyme
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_135_71
unknown

Not on your lists

comp(74378..74728)
DNA (351bp) protein (117aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_135_72
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(74821..75546)
DNA (726bp) protein (242aa)
Putative uncharacterized protein Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFA9_THIDA
hypothetical protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
PLM3_127_b2_sep16_scaffold_135_73
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75546..76385)
DNA (840bp) protein (280aa)
GlcNAc deacetylase, Carbohydrate Esterase Family 4-like protein Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4K6_RAMTT
GlcNAc deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:EWY41921.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
PLM3_127_b2_sep16_scaffold_135_74
Snodgrassella alvi, Snodgrassella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76447..77688)
DNA (1242bp) protein (414aa)
Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC:2.6.1.19)
4-aminobutyrate transaminase Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A6L7_9PROT
4-aminobutyrate aminotransferase or related aminotransferase {ECO:0000313|EMBL:KEQ01021.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Snodgrassella.;" source="Snodgrassella alvi SCGC AB-598-J21.;"
PLM3_127_b2_sep16_scaffold_135_75
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77740..79500)
DNA (1761bp) protein (587aa)
Glutamine--tRNA ligase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMX6_AZOSU
glutaminyl-tRNA synthetase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_135_76
Kangiella geojedonensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79977..81491
DNA (1515bp) protein (505aa)
hypothetical protein Tax=Kangiella aquimarina RepID=UPI0003796231
Uncharacterized protein {ECO:0000313|EMBL:AKE51881.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella geojedonensis.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_135_77
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81759..82757)
DNA (999bp) protein (333aa)
hypothetical protein Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00036C1ACD
MFS transporter
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_135_78
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82846..83664)
DNA (819bp) protein (273aa)
Enoyl-CoA hydratase/isomerase Tax=Pusillimonas sp. (strain T7-7) RepID=F4GVC3_PUSST
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AEC19947.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
PLM3_127_b2_sep16_scaffold_135_79
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(83953..85101)
DNA (1149bp) protein (383aa)
Mandelate racemase/muconate lactonizing protein bin=GWA2_Methylomirabilis_73_35 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
mandelate racemase/muconate lactonizing protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_135_80
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(85348..85866)
DNA (519bp) protein (173aa)
Putative uncharacterized protein bin=GWC2_Ignavibacteria_38_9 species=[Eubacterium] biforme genus=unknown taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3_127_b2_sep16_scaffold_135_81
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86183..87322
DNA (1140bp) protein (380aa)
gnl1; gluconolactonase (EC:3.1.1.17)
Gluconolactonase Tax=alpha proteobacterium BAL199 RepID=A8TK67_9PROT
Gluconolactonase {ECO:0000313|EMBL:EDP66994.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
PLM3_127_b2_sep16_scaffold_135_82
unknown

Not on your lists

comp(87409..87882)
DNA (474bp) protein (158aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_135_83
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88143..89561)
DNA (1419bp) protein (473aa)
GntR family transcriptional regulator Tax=Sorangium cellulosum So0157-2 RepID=S4XPY5_SORCE
Transcriptional regulator, GntR family domain / Aspartate aminotransferase {ECO:0000313|EMBL:EYF03614.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GntR family transcriptional regulator
PLM3_127_b2_sep16_scaffold_135_84
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89705..90001
DNA (297bp) protein (99aa)
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_63_51
PLM3_127_b2_sep16_scaffold_135_85
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90221..90832)
DNA (612bp) protein (204aa)
Periplasmic/membrane thiol peroxidase-like protein Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XVK7_RAMTT
periplasmic/membrane thiol peroxidase
Periplasmic/membrane thiol peroxidase-like protein {ECO:0000313|EMBL:AEG91583.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
PLM3_127_b2_sep16_scaffold_135_86
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(90871..92982)
DNA (2112bp) protein (704aa)
Thiol:disulfide interchange protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKQ4_CHLTF
Thiol:disulfide interchange protein
Thiol:disulfide interchange protein {ECO:0000313|EMBL:AEP13661.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM3_127_b2_sep16_scaffold_135_87
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

93172..94164
DNA (993bp) protein (331aa)
Uncharacterized protein Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R1W2_PIRSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB18573.1}; Flags: Precursor;; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
PLM3_127_b2_sep16_scaffold_135_88
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94185..95390)
DNA (1206bp) protein (402aa)
Mandelate racemase/muconate lactonizing protein Tax=Ochrobactrum sp. CDB2 RepID=M3KL98_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC65805.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Mandelate racemase/muconate lactonizing protein
PLM3_127_b2_sep16_scaffold_135_89
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95405..96439)
DNA (1035bp) protein (345aa)
Uncharacterized protein Tax=Pusillimonas sp. (strain T7-7) RepID=F4GNQ2_PUSST
hypothetical protein
Tax=RBG_16_Gamma2_60_9_curated
PLM3_127_b2_sep16_scaffold_135_90
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96606..97577
DNA (972bp) protein (324aa)
Biotin/acetyl-CoA-carboxylase ligase Tax=Sulfuricella denitrificans skB26 RepID=S6AAW8_9PROT
biotin/acetyl-CoA-carboxylase ligase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Displaying items 61-90 of 121 in total

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