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PLM3_127_b2_sep16_scaffold_196

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Displaying items 31-60 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_196_31
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31216..32751)
DNA (1536bp) protein (512aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase Tax=Nitrosospira sp. APG3 RepID=M5DGM8_9PROT
PLM3_127_b2_sep16_scaffold_196_32
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33044..33841)
DNA (798bp) protein (266aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-diacylglycerol--serine O-phosphatidyltransferase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBU3_NITMU
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_196_33
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33848..34495)
DNA (648bp) protein (216aa)
psd; phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=PSD_NITEU
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_196_34
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34602..35618)
DNA (1017bp) protein (339aa)
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase Tax=Nitrosomonas sp. AL212 RepID=F9ZFH9_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_196_35
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35782..36252)
DNA (471bp) protein (157aa)
Acetolactate synthase, small subunit Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CMF7_SIDLE
acetolactate synthase, small subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_196_36
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36282..38006)
DNA (1725bp) protein (575aa)
Acetolactate synthase large subunit Tax=Nitrosospira sp. APG3 RepID=M5DGB6_9PROT
acetolactate synthase, large subunit, biosynthetic type
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_196_37
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38148..38963)
DNA (816bp) protein (272aa)
Inositol monophosphatase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YC36_NITMU
inositol monophosphatase
Tax=CG_Beta_01
PLM3_127_b2_sep16_scaffold_196_38
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38948..39499)
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6AJU6_9PROT
hypothetical protein
Tax=CG_Beta_01
PLM3_127_b2_sep16_scaffold_196_39
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39601..40371
DNA (771bp) protein (257aa)
Ribosomal RNA small subunit methyltransferase E Tax=Sulfuricella denitrificans skB26 RepID=S6ABB6_9PROT
16S ribosomal RNA methyltransferase RsmE
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_196_40
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

comp(40700..41749)
DNA (1050bp) protein (350aa)
dao:Desac_0095 guanylate cyclase bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
guanylate cyclase
Tax=RBG_13_Chloroflexi_50_21_curated
PLM3_127_b2_sep16_scaffold_196_41
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41742..42098)
DNA (357bp) protein (119aa)
hypothetical protein Tax=Phaeobacter gallaeciensis RepID=UPI0002DBD532
Histidine kinase {ECO:0000313|EMBL:KID09757.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG1.;"
multi-sensor hybrid histidine kinase
PLM3_127_b2_sep16_scaffold_196_42
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(42100..48939)
DNA (6840bp) protein (2280aa)
multi-sensor hybrid histidine kinase Tax=Ruegeria conchae RepID=UPI000237963F
multi-sensor hybrid histidine kinase
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3_127_b2_sep16_scaffold_196_43
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49072..49839
DNA (768bp) protein (256aa)
Uncharacterized protein Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPV2_AZOSU
dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM3_127_b2_sep16_scaffold_196_44
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49864..51183
DNA (1320bp) protein (440aa)
Amino-acid acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01105}; EC=2.3.1.1 {ECO:0000256|HAMAP-Rule:MF_01105, ECO:0000256|SAAS:SAAS00064051};; N-acetylglutamate synthase {ECO:0000256|HAMAP-Rule:MF_01105}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
N-acetylglutamate synthase (EC:2.3.1.1)
Amino-acid acetyltransferase Tax=Nitrosospira sp. APG3 RepID=M5DTV0_9PROT
PLM3_127_b2_sep16_scaffold_196_45
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51321..51596
DNA (276bp) protein (92aa)
Probable Fe(2+)-trafficking protein Tax=Burkholderia cepacia complex RepID=FETP_BURM1
bacterial Fe(2+) trafficking family protein
Tax=BJP_S1_SUB10_Methylophilales_55_32
PLM3_127_b2_sep16_scaffold_196_46
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51850..53847
DNA (1998bp) protein (666aa)
polyphosphate kinase (EC:2.7.4.1); K00937 polyphosphate kinase [EC:2.7.4.1] bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
polyphosphate kinase (EC:2.7.4.1)
Tax=GWA2_Gallionellales_60_142_curated
PLM3_127_b2_sep16_scaffold_196_47
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53895..55415
DNA (1521bp) protein (507aa)
Adenylate cyclase Tax=Nitrosospira sp. APG3 RepID=M5DJV8_9PROT
adenylate cyclase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_196_48
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55446..55898
DNA (453bp) protein (151aa)
Phosphohistidine phosphatase SixA Tax=Nitrosospira sp. APG3 RepID=M5DGJ5_9PROT
Phosphohistidine phosphatase {ECO:0000313|EMBL:KIO48022.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
phosphohistidine phosphatase SixA
PLM3_127_b2_sep16_scaffold_196_49
CG_Gallio_02, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56093..57577
DNA (1485bp) protein (495aa)
Polyphosphate:AMP phosphotransferase Tax=Sulfuricella denitrificans skB26 RepID=S6AD56_9PROT
polyphosphate:AMP phosphotransferase
Tax=CG_Gallio_02
PLM3_127_b2_sep16_scaffold_196_50
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

58514..59968
DNA (1455bp) protein (485aa)
Efflux protein Tax=planctomycete KSU-1 RepID=I3IK90_9PLAN
Efflux protein {ECO:0000313|EMBL:GAB62135.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
copper tolerance protein
PLM3_127_b2_sep16_scaffold_196_51
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

59965..61299
DNA (1335bp) protein (445aa)
Similar to multicopper oxidase sufI Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4W7_9BACT
Multicopper oxidase {ECO:0000313|EMBL:GAN31797.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_196_52
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61380..61718
DNA (339bp) protein (113aa)
Probable Co/Zn/Cd efflux system membrane fusion protein Tax=Nitrosospira sp. APG3 RepID=M5DJ49_9PROT
Probable Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:CCU62523.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
putative uncharacterized protein
PLM3_127_b2_sep16_scaffold_196_53
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61807..62340
DNA (534bp) protein (178aa)
Uncharacterized protein {ECO:0000313|EMBL:KIF81604.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein bin=bin5_DeltaP species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
putative copper-binding protein
PLM3_127_b2_sep16_scaffold_196_54
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62450..64819
DNA (2370bp) protein (790aa)
copper-translocating P-type ATPase (EC:3.6.3.4)
Lead, cadmium, zinc and mercury transporting ATPase Copper-translocating P-type ATPase Tax=Nitrosospira sp. APG3 RepID=M5DGW6_9PROT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_196_55
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64874..65476
DNA (603bp) protein (201aa)
hypothetical protein Tax=Thioalkalivibrio RepID=UPI000367D546
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC72135.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sp. (strain K90mix).;"
PLM3_127_b2_sep16_scaffold_196_56
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65537..66826)
DNA (1290bp) protein (430aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6AE42_9PROT
MFS transporter {ECO:0000313|EMBL:GAO36822.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_196_57
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66850..67584)
DNA (735bp) protein (245aa)
beta-lactamase Tax=Thioalkalivibrio RepID=UPI000375B6F4
beta-lactamase
Beta-lactamase domain protein {ECO:0000313|EMBL:ADC71272.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sp. (strain K90mix).;"
PLM3_127_b2_sep16_scaffold_196_58
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67598..68743)
DNA (1146bp) protein (382aa)
Cysteine desulfurase {ECO:0000313|EMBL:GAO36827.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
Cysteine desulfurase bin=GWB2_Geobacter-like_52_12 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
class V aminotransferase
PLM3_127_b2_sep16_scaffold_196_59
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68842..69084)
DNA (243bp) protein (81aa)
Uncharacterized protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C2H0_NITHN
hypothetical protein
Tax=GWA2_Gallionellales_60_18_curated
PLM3_127_b2_sep16_scaffold_196_60
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69105..69242)
DNA (138bp) protein (46aa)
Uncharacterized protein bin=GWA2__Bacteriovorax-rel_49_15 species=Thioalkalivibrio nitratireducens genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
dsrE; DsrE family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Displaying items 31-60 of 72 in total

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