ggKbase home page

PLM3_127_b2_sep16_scaffold_396_13

Organism: PLM3_127_b2_sep16_Betaproteobacteria_Methylophilales_62_20

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 11739..12242

Top 3 Functional Annotations

Value Algorithm Source
Putative transcription elongation factor Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60BR4_METCA similarity UNIREF
DB: UNIREF100
  • Identity: 55.5
  • Coverage: 164.0
  • Bit_score: 178
  • Evalue 4.30e-42
transcription elongation factor similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 164.0
  • Bit_score: 178
  • Evalue 1.20e-42
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 169.0
  • Bit_score: 189
  • Evalue 2.00e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
ATGAGCCGCGCCTTCGTAAAGGACGACAACGAAGACCTGCCCAGCCAAGAATTGCCGGAGCGTCCGGTCAATTCCGAGCCGAACTACGTCACGCCGGCGGGCCTCGCGAAACTGCGCAGCAAGGTCGAAGAGCTGCACGACGAACATGTGCGCCTGAAAGGGGCGGAGGAAGACTTCGACCGGCCCCGGCTCGCGGAGATCGAGCGCGACCTGCGCTACTACCAGGCGCGGCTGGAAGCAGCCGTCCTGGTCGACGTTTCCAAACAGCCCAGGGACGAAGTGCATTTCGGCGCCAGCGTCAAGACCGAGGACCGGGGCGGTGCCGTGCGTTCCATAGCGATTGTCGGCGAGGACGAGGCGGACGCAGCCCATGGCCGTGTCAGCTGGCAGTCGCCGCTGGCGAAGGCGCTGATGGGCGCAAAAGTAGGCGATACCGTTACCTGGCACCGCCCCGCCGGCTCCACCACGCTCAACGTGCTGGAAATTCACTACCCGCGCACCTAG
PROTEIN sequence
Length: 168
MSRAFVKDDNEDLPSQELPERPVNSEPNYVTPAGLAKLRSKVEELHDEHVRLKGAEEDFDRPRLAEIERDLRYYQARLEAAVLVDVSKQPRDEVHFGASVKTEDRGGAVRSIAIVGEDEADAAHGRVSWQSPLAKALMGAKVGDTVTWHRPAGSTTLNVLEIHYPRT*