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PLM3_127_b2_sep16_scaffold_1281_11

Organism: PLM3_127_b2_sep16_Betaproteobacteria_Methylophilales_62_20

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 10359..11249

Top 3 Functional Annotations

Value Algorithm Source
tRNA 2-thiocytidine biosynthesis protein TtcA Tax=Nitrosospira sp. APG3 RepID=M5DGH8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 289.0
  • Bit_score: 427
  • Evalue 5.60e-117
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850, ECO:0000313|EMBL:KIO50351.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 286.0
  • Bit_score: 428
  • Evalue 4.60e-117
tRNA 2-thiocytidine biosynthesis protein TtcA similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 290.0
  • Bit_score: 427
  • Evalue 2.70e-117

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGGCGACATTGCAGAAACAGGTTTACGAAGGCAACAAACTCGCCAAGCGGCTGCGCCGCCAGGTCGGCGAAGCCATTGCCGACTTCGACATGATCCGCGCTGGTGACAAGGTCATGGTCTGCCTGTCGGGCGGCAAGGACAGCTACGCTCTGCTCGACATCCTGCTGTCGCTCAAGCAACATGCGCCGATCGACTTCGAAATCGTCGCGGTCAATCTCGATCAAAAGCACCCGGGATTTCCCACCGAGGTGCTGCCCGAGTACCTGACCGCGATCGGCGTGCCGTTCCGGATCGTCGAGCAGGACACCTACAGCGTGGTCAAGCGCGTCATCCCCGAAGGCAAGACCATGTGCTCGCTATGCTCGAGGCTGCGCCGCGGCGCGCTCTACCGGGTGGCAAAGGAAATCGGCGCAACCCGGATCGCCCTCGGGCACCATCGCGACGACATCCTAGAGACATTTTTCCTCAACCTGTTTCACGGCGGACGGCTCAAGGCGATGCCGCCCAAGCTGGTCAGCGACGACGGCACCCACATCGTCATCCGCCCGCTCGCCTACTGCAAGGAACAGGACCTGGAGGAATACGCAAAGATCCGCGCGTTCCCGATCATCCCCTGTAACCTGTGCGGGTCGCAGGAAAACCTGCAGCGCCAGGTGGTGAAGGACATGATGCGCGAGTGGGAGAAGAAATTCCCCGGCCGCCTGGAGATTATGTTCGCCAGCCTGCAGCGGGTTTCGCCGTCGCACCTGCTCGACCCGCAACGCTTCGATTTCAAGAACCTCAAGACCCAGTCGGACGCCTACCTCGACGGGGATATCGCCTTCGACGAGGAGAACTTCTCGGCGAAGCTGCTCCAACTCCCGATCGGCAAGGCGGCGGAGGGCAAATGA
PROTEIN sequence
Length: 297
MATLQKQVYEGNKLAKRLRRQVGEAIADFDMIRAGDKVMVCLSGGKDSYALLDILLSLKQHAPIDFEIVAVNLDQKHPGFPTEVLPEYLTAIGVPFRIVEQDTYSVVKRVIPEGKTMCSLCSRLRRGALYRVAKEIGATRIALGHHRDDILETFFLNLFHGGRLKAMPPKLVSDDGTHIVIRPLAYCKEQDLEEYAKIRAFPIIPCNLCGSQENLQRQVVKDMMREWEKKFPGRLEIMFASLQRVSPSHLLDPQRFDFKNLKTQSDAYLDGDIAFDEENFSAKLLQLPIGKAAEGK*