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PLM3_127_b2_sep16_scaffold_1505_34

Organism: PLM3_127_b2_sep16_Betaproteobacteria_Methylophilales_62_20

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(32267..33580)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein Tax=Herbaspirillum sp. JC206 RepID=UPI0002FEC31B similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 437.0
  • Bit_score: 577
  • Evalue 6.40e-162
Variovorax paradoxus strain MEDvA23 contig_138, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16013.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 442.0
  • Bit_score: 574
  • Evalue 1.00e-160
family 1 extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 442.0
  • Bit_score: 573
  • Evalue 3.40e-161

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1314
ATGACTCGAATTACACGGCGTCGATTTCTCCAGGCTTCCGCTGTAGCGGGCGCCGCACTCGGCACGCCGATGCTGGCGCGCGACTCTTACGCGCAGGAGCTTTCCTTCAAACCCGAGCAGGGTGCGAAACTCCGGGTGTTGCGCTGGAAGCGCTTCGTCCAGGGCGACGAAGACCAGTGGATGGCCAACACCAGGGCGTTCACCGCAAAGACTGGCGTAGAGGTCACGGTGGACAACGAAAATTGGGAGGACTTGCGTCCCAAGGCCGCGGTCGCCGCGAACGTGGGCAGCGGACCCGACATCATTCTGTCCACCAACGACGACCCGCACCAGTATCCGGACAAGCTGCTCGAAATTGGCGACCTGTGTGAATACCTCGGCAAGAAGTACGGGCCGTGGTACCCGGGCGCGCTGGCGTATGGCAAAAGCGGCGGGCGCTGGATCGCGCTGCCGCTGGGCTCGGGCGGCAACTGCATGAACTACCGCACCAGTCACTTGAAGGCCGCCGGCTTCAAGGAATTCCCCAAAGATACTGACGGGTTTCTGAAGCTGTGCAAGGGGCTGAAGAAGAACGGCACACCGTCCGGATTCGCGCTCGGCAACGCCACCGGGGACGCCAACGCCTGGTGCCACTGGCTGATCTGGGCATTCGGCGGAAAGATGGTGGATGAGCAGAACCGGCTGACGATCAATTCGAAGGAAACCGCCGCCGCGTTGGAGTACGCCAGGGAACTGTATCCGACCTTCGTTTCCGGCACGCTGTCCTGGCTCGATCCGAACAACAACAAGGCTTTCCTCGCCGGGGATATCAGCCTCACCAGCAACGGCATCTCGATCTATTACGCGGCAAAGACGTCCAAGGACCCGAAGCTGCAGGAGATCGCCAAGGACATGAACCATGCCGTGTTCCCGGTCGGGCCGGTCGGCCACCCGACAATGAGCGCGCTGTTTTTTACCTGCGTGATCTTCAAGTACACAAAGTATCCGAACGCGGCCAAGGAGTACTTGCGCTTCATGATGGAGAAGGAGCAGTACGAAGAGTGGCAGAAGGCATCGATCGGCTTCGTCACCCAGCCGCTGAGCTTCTACGAGCGTAACCCGGTGTGGACCGCGGACCCTAAGCACACGCCGTTCAAATATTCCTGCAAGAACATGCTGCCCAACGGCTACGCCGGTACGCTCGGCGCCTCGTCGGCGGGTTGCATCGCCGATTTCATCGTGGTCAACATGGTCGCCGAGGCCGCCTCCGGTGCCACAACCGTCAAGGATGCGATGTCCAGGGCGGAGAAGCGGGCGAAGCGGTATTACAGGTGA
PROTEIN sequence
Length: 438
MTRITRRRFLQASAVAGAALGTPMLARDSYAQELSFKPEQGAKLRVLRWKRFVQGDEDQWMANTRAFTAKTGVEVTVDNENWEDLRPKAAVAANVGSGPDIILSTNDDPHQYPDKLLEIGDLCEYLGKKYGPWYPGALAYGKSGGRWIALPLGSGGNCMNYRTSHLKAAGFKEFPKDTDGFLKLCKGLKKNGTPSGFALGNATGDANAWCHWLIWAFGGKMVDEQNRLTINSKETAAALEYARELYPTFVSGTLSWLDPNNNKAFLAGDISLTSNGISIYYAAKTSKDPKLQEIAKDMNHAVFPVGPVGHPTMSALFFTCVIFKYTKYPNAAKEYLRFMMEKEQYEEWQKASIGFVTQPLSFYERNPVWTADPKHTPFKYSCKNMLPNGYAGTLGASSAGCIADFIVVNMVAEAASGATTVKDAMSRAEKRAKRYYR*