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PLM3_127_b2_sep16_scaffold_2225_9

Organism: PLM3_127_b2_sep16_Betaproteobacteria_Methylophilales_62_20

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(7024..7452)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 Tax=Herbaspirillum sp. CF444 RepID=J3DH17_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 142.0
  • Bit_score: 240
  • Evalue 6.10e-61
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 142.0
  • Bit_score: 242
  • Evalue 2.90e-61
rplM; ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 140.0
  • Bit_score: 239
  • Evalue 3.80e-61

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Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
ATGAAAACATTTTCAGCCAAGACGCACGAGGTGAAGCGCGATTGGTTCGTGATCGACGCCACCGACAAGGTGCTTGGGCGCCTGGCCGCCGAGATCGCGAAACGCCTGCGCGGCAAACATAAAGTTACGTTTACTCCGCATGTGGACACCGGTGATTACATCGTTGTCGTCAACGCCAAAAAACTGCGCGTAACCGGCAACAAGGCCACACAAAAAATTTACTATCGCCACTCCACTTACCCGGGCGGCATTTACAGCTCCAGCTTCGCCAAACTGCATGGCAGATTCCCCGGCCGCGTGCTGGAAAAGGCGGTAAAAGGCATGCTGCCAAAAGGCCCGCTTGGCTATGCGATGCTGAAAAAACTGAAGGTCTATCCCGATGGCGATCACCCGCACGCCGCGCAACAGCCGCAAGCGCTGAATTTCTAG
PROTEIN sequence
Length: 143
MKTFSAKTHEVKRDWFVIDATDKVLGRLAAEIAKRLRGKHKVTFTPHVDTGDYIVVVNAKKLRVTGNKATQKIYYRHSTYPGGIYSSSFAKLHGRFPGRVLEKAVKGMLPKGPLGYAMLKKLKVYPDGDHPHAAQQPQALNF*