ggKbase home page

PLM3_127_b2_sep16_scaffold_22343_4

Organism: PLM3_127_b2_sep16_Betaproteobacteria_Methylophilales_62_20

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(2853..3551)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 Tax=Sulfuricella denitrificans skB26 RepID=S6B183_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 231.0
  • Bit_score: 368
  • Evalue 3.20e-99
rplA; 50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 231.0
  • Bit_score: 368
  • Evalue 8.90e-100
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 231.0
  • Bit_score: 368
  • Evalue 4.40e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfuricella denitrificans → Sulfuricella → Sulfuricellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGGCACATATTTCCAAGCGAACTAAGGAGTTGCGGGCCAAGATCGACCGCAGCAAGGCGTACCCGATCGCCGATGCGATCAAACTGGTGAAAGAAGGCGCCAGCGCCAAATTCAACGAATCTGTGGACGTTGCCATCAATCTCGGCATCGACGCCAAGAAGTCCGATCAGACCGTACGCGGTTCGATCGTGCTGCCCAAGGGCACCGGCAAGACAGTGCGGGTGGCAGTGTTTGCGCAGGGCGACAAGGCGCAGGCGGCCAAGGATGCCGGAGCCGACATCGTCGGGTTCGAGGACCTCGCCGCCCAGGTCAAGGAAGGCAAGATCGACTTCGACGTGGCGATCGCCACGCCCGACGCGATGCGTGTGGTCGGCCAGCTCGGTCAGGTCCTCGGCCCGCGTGGCCTGATGCCGAACCCGAAAGTGGGCACGGTCACGCCGAATGTCGCCGATGCAGTCAAGAACGCCAAGGCCGGCCAGGTCCAGTACCGCGCCGACAAGGCCGGCATAGTCCAGTGCACCATCGGTCGCGCCTCGTTCACCGAAGACGCGCTGAAGGAAAACTTTCTGGCGTTGATGGACGCATTGAACAAATCGAGGCCCTCGGGGACTAAGGGCATCTATCTGAAGAAAGTCTCGGTCGCCAGCACCATGGGGCCGGGCGTGCGGGTGGACCAGGCCAGCCTGGGCGCCCAGTAG
PROTEIN sequence
Length: 233
MAHISKRTKELRAKIDRSKAYPIADAIKLVKEGASAKFNESVDVAINLGIDAKKSDQTVRGSIVLPKGTGKTVRVAVFAQGDKAQAAKDAGADIVGFEDLAAQVKEGKIDFDVAIATPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVADAVKNAKAGQVQYRADKAGIVQCTIGRASFTEDALKENFLALMDALNKSRPSGTKGIYLKKVSVASTMGPGVRVDQASLGAQ*