ggKbase home page

PLM3_127_b2_sep16_scaffold_1092_17

Organism: PLM3_127_b2_sep16_Chloroflexi_62_8

near complete RP 53 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(11786..12343)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 182.0
  • Bit_score: 211
  • Evalue 6.70e-52
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 182.0
  • Bit_score: 130
  • Evalue 4.30e-28
Tax=RBG_16_Chloroflexi_63_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 184.0
  • Bit_score: 240
  • Evalue 1.10e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Chloroflexi_63_12_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 558
ATGGTCACACCCTCAGACCGAGAGCTAGCGGAGCGGGCGCGCGGGCGCGACCCGGAGGCTGCCGCTGACGCTTACGGTGAACTGGTGCGGCGGTATCAGGCATCCGTGTTTAACGTGTGTTACCGGTTGGCAGGTGAGCGCCGCTTGGCGGAAGACCTAGCGCAGGAGGCCTTCCTCCGCGCCTACCAGCGGCTCAATACTTTTGACCTGGAGCGGCCCTTCGGCCCGTGGATGCGGCGCGTGGCCGCTAACCTGTGCCTGAGCCGTTTGCAGACGAGCCCGCCGCCCACTTTTTCGCTTGAGGACGAACATGACGAGCCCGCCGGGATAGAGCATGGCGACCCGGAGGCCGCGCTGGAGCAGGCCGAACGAGCGCGGGCGGTGCGCGAGGCGCTGTTAAGCCTGCCCCCGCACTACCGGGCGGTCATCGAGTTGCGCCATTTTCAGGACTTAAGTTACGATGAGATTGCGGCGGCGCTCCGCCTGCCGTTGAGCGACGTGAAGAGCCATTTGTTTCGCGCCCGCAAATTGCTGGCGCAGAAATTAGGACGCGGGTGA
PROTEIN sequence
Length: 186
MVTPSDRELAERARGRDPEAAADAYGELVRRYQASVFNVCYRLAGERRLAEDLAQEAFLRAYQRLNTFDLERPFGPWMRRVAANLCLSRLQTSPPPTFSLEDEHDEPAGIEHGDPEAALEQAERARAVREALLSLPPHYRAVIELRHFQDLSYDEIAAALRLPLSDVKSHLFRARKLLAQKLGRG*