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PLM3_127_b2_sep16_scaffold_339_30

Organism: PLM3_127_b2_sep16_Actinobacteridae_Actinomycetales_72_71

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 35349..36053

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WGM1_KINRD similarity UNIREF
DB: UNIREF100
  • Identity: 49.5
  • Coverage: 192.0
  • Bit_score: 161
  • Evalue 5.90e-37
ECF family RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 192.0
  • Bit_score: 161
  • Evalue 1.70e-37
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 178.0
  • Bit_score: 172
  • Evalue 4.70e-40

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGGCCGACGAGGAGCTGCTGGCCGCGCACCTGCGGGGCGACCGGTCGGCCTTCGGCCAGCTCGTGTCAAGGCACGAGCGGCGCATCTACGGGATCTGCCTGCGCATGCTGGGCAACCGGGAGGACGCGCAGGACGCCACCCAGGAGGCGTTCCTGGCCGCGCTGCGCCGGGCCTCGACCTTCCGCCAGGCGGCCGCGTTCTCGACCTGGCTCTACCGGATCGCCGTCAACGCGGCCACCGACCAGGCCCGGCGGCGCGCGAGGGCCCGCACCAACCCCCTCGACCCCGAGGCACCACCGCAGCTGCCCCGCGAGACGGCCACCGGCGACCCGGGCGACGCGGTGGCCACCGCCGTCGCCGTCCAGTCCGCCCTGACCTGCATCCCCGAGGACTTCCGGGTGGCCGTGGTCCTCTGCGACCTGCTCCGGCTGCCGTACGCGGAGGCCGCCGATATCCTCGAGGTACCGGTCGGCACGCTCAAGAGCCGGGTGTTCCGCGGCCGCCTTGCCCTGGCCGAGCAGCTCAGCGAGCTCGGCCGGGCCGGGCCGGGGCTGCGGGCCGTGCGCGGCGCCGGCGCCCGCCTGAGCCCCGCGGGAACCGGCGCGCTGGCCCGAGCGTCCGAACCGGTGGACGACGAACGACCGACCACGACGAGCCGGACCACCGGACGACCAACGAACGAACAACCGACCGACCACGACTAG
PROTEIN sequence
Length: 235
MADEELLAAHLRGDRSAFGQLVSRHERRIYGICLRMLGNREDAQDATQEAFLAALRRASTFRQAAAFSTWLYRIAVNAATDQARRRARARTNPLDPEAPPQLPRETATGDPGDAVATAVAVQSALTCIPEDFRVAVVLCDLLRLPYAEAADILEVPVGTLKSRVFRGRLALAEQLSELGRAGPGLRAVRGAGARLSPAGTGALARASEPVDDERPTTTSRTTGRPTNEQPTDHD*