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PLM3_127_b2_sep16_scaffold_25_5

Organism: PLM3_127_b2_sep16_Actinobacteridae_Actinomycetales_72_71

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 5160..8822

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 1156.0
  • Bit_score: 1234
  • Evalue 0.0
Transcription-repair-coupling factor Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A7M0_THECD similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 1156.0
  • Bit_score: 1234
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 1156.0
  • Bit_score: 1234
  • Evalue 0.0

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Taxonomy

Thermomonospora curvata → Thermomonospora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3663
GTGCGTCTGGAACCGCTGCTCGACCGCTGGCCTGCCGATCCCTGGTTCGCCGAGCTGGCCGTCGCGCTCGACGAGGGTGGCGCGGCCGGTGCCCCGGAGGGTGGCGCGGCCGGTGCCCCGGAGGGTGGCGCGGCCGGTGCCCCGGAGGGTGGCGCGGCCGGTGCCCCGGAGGGTGGCGCGTCCAGGGGAAGGCCGGTCGAGGTCGTCGTGCCCGACGTGGCGCGCGCGTTCCTGCTCGCGGGCCTCGCCCACCGCGGCTGCCTGGTGGTCGCGGTCACCGCCACCACTGCCGACGCCGAGTCGCTGGCCGAGGACGCGGCGGCGTTCCTCGGCCCGGACCGGGTGGCGGTCTTTCCCGCCTGGGAGACCCTGCCCCACGAGCGCCTCTCGCCGCGCTCCGAGACGGTCGGCCGGCGCCTGGCCCTGCTGCACCGGTTGGCCGACCCGGGTGCCGCGCCGCTCGCCCTCCTGGCCGTGCCCGCCCGGGCGGCGATGCAGCCGCTCGCCCCCGGCCTGGACACGATCGACCCGGTCCGGGTGGCCAGGGGCGACCGGGTCGACCTCGAGGACCTTCTCGAACGGCTGGTCGCGGCGGGGTACGAGCGCACCGACATGGTGGAGCGGCGCGGTGAGGTGGCCGTGCGCGGCGGGCTGGTCGACTTCTTCCCGCCTGGCGAGGACCACCCGGTCCGGGTCGAGTTCTGGGGTGACGAGGTCGAGGGCGTCCGGTCGTTCGCGGTGGCCAGCCAGCGCTCGCTCACCGAGCTGTCCGCGGTGGAGGCGTTCCCCTGCCGCGAGGTCCGCCTGACCGCGGCGGAGCGCCAGCGCGCGCGCGAGCTCGCCGGCGAGGTGCCGGCCGTCGGCGACCTGCTCGCCCAGGTCGCCGAGGGGCTCGTGGTCGAGGGCCTCGAGTCGCTGCTGCCCCTGCTCTTCGACGAGCTGGTACCGTTCCCCGCCTACCTCCCGCCTGACGCCGTGCTGGTCCTGGTCGATCCCAAGAAGACCCTTGACCGCGCCGAGGAGGTCCGCGTCCAGGCCGAGGAGGCGCTCCAGGCGTCGTGGGCGACCGCCGCCGAGGGGGGCAGGGCGCCGGTCGAGAGCGCCGGCTACCTGCCGCTCGACGAGGTTCTGGGCGGCTCGGACCGGACCGTGCTGCGGATCGGACCGTTCGACTCGGGCAGCCCGGCCGCTGTCCGGATCGAGGCCCACACGATCGGGCCCTACCGGGCCAACGTCGCCCGGGTGGCCGCCGACGCCCGCCGGCTCGCCGCCGAGGGCTACACCGTGCTGCTCTGCACCGAGGGCGCCGGGCCGGCCGAGCGCCTGGTCGCCGTGCTGGGCGACGAGGGGCTGCCCGTGCCCCTGGCCGTGGAGCCGCCCGGGCCTGGGGAGGCGGGGGTGGTGGTCGGCACCGCCGGCGTGCTCACCGGGTTCCGGCTCCCCACCCTCAGCTTGGCGCTGGTCGCAGAGGGCGACCTGTACGGCACCCGCCGGCAGACCAGGGAGCAGGCCCGCATGCCGTCCACCCGCCGCCGCTCCCGGCACGCGGGCGCCTCGATCGCGCTGGAGGAGCTGCAGCCGGGCGAGGTCGTGGTGCACGCCGTGTACGGCATCGGCCGCTACGTCGGCATGGAGCACCGCACCGTGGCCGGGGCCGAGCGCGACTACCTGCTGCTCGCCTACGACCAGGGCGACCGCCTCTACCTGCCCAGCGAGCAGGTCGAGATGATCAGCCGCTACGTCGGCGGCGAGGCGCCCAAGCTGTCCCGGCTGGGGAGCAAGGAGTGGGACCGGCAGAAGGCCAGGGTCCGCAAGAAGGTCAGGGAGATGGCGGCCGAGCTGGTCCGGCTCTACTCGGCCCGCATGGCCTCGCCCGGCCACGCGTTCGCGCCCGACGCGCCCTGGCAGCGCGAGCTGGAGGACGCCTTCCCCTTCAGCGAGACCCCCGACCAGCTCACCGCCATCGAGGAGGTCAAGGCCGACATGGAGGCGCCCGTCCCGATGGACCGGCTGCTCTGCGGCGACGTCGGCTACGGCAAGACCGAGGTGGCCGTGCGGGCCGCCTTCAAGGCGGTCATGGACGGCAAGCAGGTCGCCGTCCTGGTGCCCACCACCCTGCTCGCCCAGCAGCACTTCGCCACCTTCGGCGAGCGCTTCGCGCCCTTCCCGGTCAATGTCGGCACCCTCTCCCGCTTCCAGTCCAAGAAGGAGCAGGAGGAGCTCGTCGCCGCGATGGCCGACGGCACCGTCGACGTGGTCATCGGCACCCACCGCCTGCTCTCGGCCGACGCCAGGTGGGCCGACCTCGGCCTGGCCGTGGTCGACGAGGAGCAGCGCTTCGGCGTCGTCCACAAGGAGCACCTGAAGCAGCTCCGCACCGAGGTCGACGTGCTCACCCTCACCGCCACCCCGATCCCGAGGACGCTCGAGATGAGCATCTCCGGGATCCGGGACATGTCGGTGATGGAGACCCCGCCCGAGGAGCGCCACCCGGTGCTCACCTTCGTCGGCCCCTACGACGAGGCCACGGTCGCCGACGCCGTGCGGCGCGAGATGCTCCGCGAGGGCCAGACCTTCTTCGTGCACAACCGGGTCGACACCATCGACCGGGTCGCCCTGCGCGTCCGCCAGCTGGTCCCCGAGGCGCGGGTCGGCGTGGCCCACGGCCAGATGATCGAGGAGCAGCTCGAGCGGGTGATGCTCGAGTTCTGGGACAAGAAGTACGACGTGCTGGTGTGCACCACCATCATCGAGTCCGGCATCGACATCCCCACCGCGAACACCCTGGTCGTCGACCGGGCCGACACCCTCGGCCTGGCCCAGCTCTACCAGCTCCGCGGCCGGGTCGGCCGCTCCCGCGAGCGGGCCTATGCCTACCTGTATTACCCGCCCGAGCGCAGCCTCACCGAGACCTCGCACGCGCGTCTGTCCACCGTCGCCGCCCATCAGGACCTCGGCTCGGGCAGGGCCATCGCCATGAAGGACCTGGAGATCCGCGGCGCCGGCAACCTCCTCGGCGCCGACCAGTCCGGCCACGTCGCCCTGGTCGGCTACGACCTGTACATGCAGATGCTGGCCGAGGCCGTGGCCGAGATGCGCGGGCGGCCCATCGAGCAGCCCAAGGACCTCAAGCTCGAGGTCCCGGTCGACGCACACCTGCCCGCCACCTACGTCCAGCGCGAGCGGCTCCGCCTGGAGGCCTACCGGCGTCTGGGCGGGGCCAGGGCGGTCGACGAGGTGGCGGCGCTCGGGGCCGAGCTGGCCGACCGCTACGGGCCACCGCCACTCCCGGTGCGCAACCTCCTGGCCCTGGCGGGCGTCCGCGCCCAGGCGGCCGCCCTCGGGCTCACCGAGGTGGTCTGCTTCGGCGGCCAGGTCCGGCTCGCGCCGGTGCCGACGCTCCCCGAGTCCAAGCAGGTCCGCCTCGACCGCCTCTACCGGGGCGCGGTCTGGAAGGCGGCCGAGCAGACGCTGGTCGTGCCCCTGCCCACCGGCCCGCGCGCGGCCAAGCTGGGCGCCGCCGGGGGAGAGGACGCCGTCGACCTGCCCGCCTGGCTGTCCGAGCTGCTGGAGGGCGTCCTCGGAGCCCCGGCGGCGCCCAGCTTGGCCGCGGCCGACCGTCGCGAGCCCCACCGGGCCGCGTCCTCGGCCGGGCTGCCGTAA
PROTEIN sequence
Length: 1221
VRLEPLLDRWPADPWFAELAVALDEGGAAGAPEGGAAGAPEGGAAGAPEGGAAGAPEGGASRGRPVEVVVPDVARAFLLAGLAHRGCLVVAVTATTADAESLAEDAAAFLGPDRVAVFPAWETLPHERLSPRSETVGRRLALLHRLADPGAAPLALLAVPARAAMQPLAPGLDTIDPVRVARGDRVDLEDLLERLVAAGYERTDMVERRGEVAVRGGLVDFFPPGEDHPVRVEFWGDEVEGVRSFAVASQRSLTELSAVEAFPCREVRLTAAERQRARELAGEVPAVGDLLAQVAEGLVVEGLESLLPLLFDELVPFPAYLPPDAVLVLVDPKKTLDRAEEVRVQAEEALQASWATAAEGGRAPVESAGYLPLDEVLGGSDRTVLRIGPFDSGSPAAVRIEAHTIGPYRANVARVAADARRLAAEGYTVLLCTEGAGPAERLVAVLGDEGLPVPLAVEPPGPGEAGVVVGTAGVLTGFRLPTLSLALVAEGDLYGTRRQTREQARMPSTRRRSRHAGASIALEELQPGEVVVHAVYGIGRYVGMEHRTVAGAERDYLLLAYDQGDRLYLPSEQVEMISRYVGGEAPKLSRLGSKEWDRQKARVRKKVREMAAELVRLYSARMASPGHAFAPDAPWQRELEDAFPFSETPDQLTAIEEVKADMEAPVPMDRLLCGDVGYGKTEVAVRAAFKAVMDGKQVAVLVPTTLLAQQHFATFGERFAPFPVNVGTLSRFQSKKEQEELVAAMADGTVDVVIGTHRLLSADARWADLGLAVVDEEQRFGVVHKEHLKQLRTEVDVLTLTATPIPRTLEMSISGIRDMSVMETPPEERHPVLTFVGPYDEATVADAVRREMLREGQTFFVHNRVDTIDRVALRVRQLVPEARVGVAHGQMIEEQLERVMLEFWDKKYDVLVCTTIIESGIDIPTANTLVVDRADTLGLAQLYQLRGRVGRSRERAYAYLYYPPERSLTETSHARLSTVAAHQDLGSGRAIAMKDLEIRGAGNLLGADQSGHVALVGYDLYMQMLAEAVAEMRGRPIEQPKDLKLEVPVDAHLPATYVQRERLRLEAYRRLGGARAVDEVAALGAELADRYGPPPLPVRNLLALAGVRAQAAALGLTEVVCFGGQVRLAPVPTLPESKQVRLDRLYRGAVWKAAEQTLVVPLPTGPRAAKLGAAGGEDAVDLPAWLSELLEGVLGAPAAPSLAAADRREPHRAASSAGLP*