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PLM3_127_b2_sep16_scaffold_195_72

Organism: PLM3_127_b2_sep16_Deltaproteobacteria_Myxococcales_74_14

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(79036..81087)

Top 3 Functional Annotations

Value Algorithm Source
Ligand-gated TonB-dependent outer membrane channel Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5E8F9_GEOBB similarity UNIREF
DB: UNIREF100
  • Identity: 27.7
  • Coverage: 671.0
  • Bit_score: 205
  • Evalue 1.00e-49
ligand-gated porin similarity KEGG
DB: KEGG
  • Identity: 27.7
  • Coverage: 671.0
  • Bit_score: 205
  • Evalue 2.90e-50
Tax=RBG_16_Anaeromyxobacter_69_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.0
  • Coverage: 696.0
  • Bit_score: 596
  • Evalue 2.90e-167

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Taxonomy

RBG_16_Anaeromyxobacter_69_14_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2052
TTGAGCGGCCTCGGTCCCCGTCGCGCCGCGGCCGCGGCCCTGGCCCTCCTGCTCGCGCTGCCCGGCGCGGCGCAGGCCCCGCCCGTCGAGCTCGGCGAGGTCGGGCTCGAGGAGCTGCTCGACCTCGACGTGGAGGCGGTCACGCGCCGTGAGGAGCGGGCCTCCGGCGCGCCGGCGTGGGTGTTCGTGCTCACGCGCGAGGATCTGCGCCAGCACGGCTTCCGCACCCTGCACGAGGCGCTCGCCGCCCTGCCCGGCCTCTTCGGCTACGCCGACGGCCTCTACCCGATGGCGGGGGTGCGCGGCATCGGGCTCCTCTCCGACTACTCCACGCGCCTGCTCGTGCTGCTCGACGGCCACCCGCTCAACAACAGCCTCGGGATCGGCGAGTCGTACCTCGGGCGCGACCTGCCGGTGCCGCTCGGCGCCGTGTCCCGCATCGAGGTGATCGAGGGGCCGGTGGGGGGCGTCTACGGGCCGACCGCCTTCCTCGGCGTCGTGAACGTCGTCACCGAGCGGCCCGCCTCCTCGCGACGGGTGGAGGCGCTCGGCGCGATCGAGGGGCGGCAGGAGCGGCTCGCCGCCGGCGAGGCCGAGCTGCTCGCGACCGGCGCGGCCGGTCCGGCGCGTGCGAGCGTCGCCCTCGGTGGGTCGGGGGGGCGCGGGCAGTCGTGGCGGTTCCCGGAGCTCGCCCTCGACGCCGACCGCGCCGTGCCGGAGGACCTGCGCGTCCGCGGCGCCGACGACGCCGCGGCCCTCTCCGGCTACGCGCGCCTCGCGCTCGGACGGCTCGAGGCGGCCGCCGCGTGCGCCCGCGATCGCCGCACCCTGCCGTCCGCGCCGTACGGCGCCCTCGTCGGCGACCCGCGCACGGAGCTCGTGAACCGCACCTGCTTCGCCGAGCTCACGCTGCGGACGACACCGCGCCCGGGCTTCTCCCTCGAGGCCCGGGCCGCCTACGACGACTTCCTGTTCGAGGACGCGTACGGCTACGAGCCCGCGCCCGAGGGGACGGGGATCATCCGAGACCGCGGCGTGGACCGCTGGCTCTCCGCCGAGCTCCGCGGCGGCTGGCAGGCGCGGCCCGGCACCTGGCTCTCGGCGGGGATCGCCGGCCAGGTCCACCACACCTCGCAGGAGGTCACCGACCTCCGCCCCATCCACAAGGATTTCCGGACGGTGAACGTGGCGCTCGCCGCCGACCAGGCGGTGGGCCCGGCGGTCCGGCTCCACGGCGGGCTCACCTTCCACGCGAACGAGCTCTTCGGCGCGCGCCTCACCCCGCGGGTCGCGGCGGTGCTCTCGCCGGGCAAGGCGGACACGCTGAAGCTGCTCTACTCGGAGGGCTTCCGGGCGCCGACCGCCGCCGAGGCCTTCTTCGAGGACGGCACCGACTTCCTCGCGAGCCCGGACCTCCGGCCCGAGGTCGCGCGCTCGGCGGAGGTGATCTGGGAGCACCGCGCGGGCGCCTGGGCCACCGCGTCGCTCTCCGCCTTCCGCACCGTCTACCTCGACCTCGTGGAGTTCGTGACGGTGCCCGCCCCGGGCCTGCCCGGGCCGCCGGATCCGGCCGACCCCTCCCAGCTCCGCCAGCAGGCTCGGAACGCCGGCACGCTCCACACCCTGGGCGCCGTGGCGGCGCTGCGGCTCCGGCTCGGCGGGCGGCTGTCGGGCTGGGCCGGGATCTCGGCGCAGCGCGCCGACGGCGAGCGGCTCGCCAACTTCCCCGCGGCGACCGCCAGCGCCGCCCTCGCGTGGCGCACGCCCTGGCCACGGCTCACGCTGGCGGTGTCGGGGGTCGCCCTCGCCGCCCGGCGCAAGGACCTCTCCGCGCTCCTCCCCGGGGAACGGTCCGAGGTGCCCGCGGCCGCGTCGTTCGGCGCCTCGGCGATCCTCGACGTCGCGCGCGTGCCGGGGCTCTCCGTGGAGCTCGCGGTCCGGAACCTCGGCGCCGGGTCGCTCGTCCACCCGGTGACTGGCGACTTCACCCCCGTCAGCGAGCAGCCCGAGCCGGCGCCGGCCGTGCGGCTCGCGCTCCGGTACGCGCCGTGA
PROTEIN sequence
Length: 684
LSGLGPRRAAAAALALLLALPGAAQAPPVELGEVGLEELLDLDVEAVTRREERASGAPAWVFVLTREDLRQHGFRTLHEALAALPGLFGYADGLYPMAGVRGIGLLSDYSTRLLVLLDGHPLNNSLGIGESYLGRDLPVPLGAVSRIEVIEGPVGGVYGPTAFLGVVNVVTERPASSRRVEALGAIEGRQERLAAGEAELLATGAAGPARASVALGGSGGRGQSWRFPELALDADRAVPEDLRVRGADDAAALSGYARLALGRLEAAAACARDRRTLPSAPYGALVGDPRTELVNRTCFAELTLRTTPRPGFSLEARAAYDDFLFEDAYGYEPAPEGTGIIRDRGVDRWLSAELRGGWQARPGTWLSAGIAGQVHHTSQEVTDLRPIHKDFRTVNVALAADQAVGPAVRLHGGLTFHANELFGARLTPRVAAVLSPGKADTLKLLYSEGFRAPTAAEAFFEDGTDFLASPDLRPEVARSAEVIWEHRAGAWATASLSAFRTVYLDLVEFVTVPAPGLPGPPDPADPSQLRQQARNAGTLHTLGAVAALRLRLGGRLSGWAGISAQRADGERLANFPAATASAALAWRTPWPRLTLAVSGVALAARRKDLSALLPGERSEVPAAASFGASAILDVARVPGLSVELAVRNLGAGSLVHPVTGDFTPVSEQPEPAPAVRLALRYAP*