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PLM3_127_b2_sep16_scaffold_8952_9

Organism: PLM3_127_b2_sep16_Gammaproteobacteria_64_8

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(10385..10693)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD Tax=mine drainage metagenome RepID=T0ZJR9_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 102.0
  • Bit_score: 194
  • Evalue 3.60e-47
RNA polymerase, sigma 70 subunit, RpoD {ECO:0000313|EMBL:EQD30050.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 102.0
  • Bit_score: 194
  • Evalue 5.00e-47
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 101.0
  • Bit_score: 178
  • Evalue 7.50e-43

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 309
GACGACGAGGATTCACACCTGGGGGACTTCATCGAGGACACCTCGGTCGATTCACCGATCGATGCGGCCACCATGGAGTCGCTGCGTGAGACGACGCACGCGGTACTCGCGGGCCTCACGCCGCGCGAGGCCAAGGTGCTGCGCATGCGCTTCGGAATCGACATGAACACCGACCACACTCTGGAAGAAGTCGGCAAGCAGTTCGACGTCACCCGTGAACGCATCCGCCAGATCGAAGCCAAGGCGCTGCGCAAGCTCCGTCACCCGAGCCGCAGCGAGCAGCTGCGCTCGTTTCTGATGGAAGACTGA
PROTEIN sequence
Length: 103
DDEDSHLGDFIEDTSVDSPIDAATMESLRETTHAVLAGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEQLRSFLMED*