ggKbase home page

PLM3_127_b2_sep16_scaffold_10852_5

Organism: PLM3_127_b2_sep16_Gammaproteobacteria_64_8

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 3989..7135

Top 3 Functional Annotations

Value Algorithm Source
Type I restriction endonuclease, HsdR family bin=GWC2_Methylomirabilis_70_16 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 1051.0
  • Bit_score: 1753
  • Evalue 0.0
type I restriction endonuclease, HsdR family similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 1048.0
  • Bit_score: 1625
  • Evalue 0.0
Tax=GWC2_Rokubacteria_70_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 1048.0
  • Bit_score: 1752
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Rokubacteria_70_16_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 3147
ATGGCCGGCTCGTTAACCGAGTCTGTCGTCGAGGACGCCGCGCTCGCCTGGCTGGAGTCGCTCGGCTACGCAGTCCTGCACGGCCCCGACATTGCTGTCGGCGAGCCTGCGGCTGAACGCAGCGACCCGAACTACCGGGACGTGGTGCTGGAAGGCCGCTTGCGCCAGGCGCTTGCGCGCCTCAACCCGAACCTGCCGCCCGAGGCGCTGCAGGATGCATTCCGCAAACTGACGCGCAGCGACGCGCCGACGCTCGTGGAACGCAATCGCGCGGTCCACAGGATGCTCGTGGATGGCGTGACAGTTGAGTTCCGCCGCAAGGAGGGTTCCATCGGCGGGGCGCCGGCGCAGGTGATCGACTTCGATACGCCGGACGACAACGACTGGCTGGCGGTCAATCAGTTCACCGTATGCGAGGGCCAACATAACCGCCGACCGGACGTTGTGCTGTTCGTGAACGGTCTGCCGCTCGCCGTCATCGAGCTGAAGAATCCGGCGGATGAGAACGCCACGCTGTGGTCCGGGTTTCAGCAGCTTCAGACTTACCAGGCACAGATTCCGGCACTGTTCGCGACCAACGCTGCGCTGGTTGTTTCCGACGGCGTGCAGGCGCGCATCGGTGCGCTTGGCGCGGGCAAGGAATGGTTCAAGCCCTGGCGCACGATCACCGGGCGCGAGGATGCCTCCGCGCGACTGCCGGAGTTGCAGGTCGTGCTGGAGGGGGTGTTCGAGAGGCGCCGCTTTCTTGAGCTGCTGCGCTATTTCATCGTGTTCGAGGATTCCGCCGCAGACGGCGGCGCAGGCACGCTGGTCAAAAAGATGGCGGGCTATCACCAGTTCCATGCCGTGAACGTGGCCGTGGAGGAAACGCTCAGGGCCGCGAAGGTCGCGGCGCAGCCGCTCGGGCGCTACGCGGCCGGCCATCAGCCGGGAGGCGAAGAGGGCGATCGGCGCGTGGGTGTGGTGTGGCACACGCAGGGTTCGGGCAAGAGCCTGACCATGGCTTTCTATGCCGGGCGGGTGATCCTGCACCCGACGATGGCCAACCCGACGATCGTGGTGCTCACCGACCGCAACGACCTCGACGACCAGTTGTTCGGCACCTTCGCGCGCTGCCGCGACCTGCTGCGCCAGCCGCCGGTGCAGGCCGCCGACCGCGCCGATCTGCGCGCGAAGCTCGCGGTCGCCTCCGGTGGTGTGGTGTTCACCACCATTCAGAAGTTCTTCCCGGAGGAAAAGGGCGACCGTCATCCGGTGCTGTCGGAGCGGCGCAACATCGTCGTCATCGCCGACGAGGCGCACCGCAGCCAGTACGACTTCATCGACGGCTTCGCGCGGCACATGCGCGACGCGCTTCCGCATGCCTCGTTCGTTGGCTTCACCGGCACGCCAATCGAGAAGACCGACGCCAACACTCGCGCAGTGTTCGGCGACTACATCAGCGTGTACGACATCCAGCGGGCGGTCGTCGATGGAGCCACCGTTCCGATCTACTACGAGAGCCGCCTCGCCAAACTGGAACTGAAGCAATCGGAACGTCCGAAGATCGACCCCGAATTCGAAGAGGCGACCGAAGGTGAAGAGGTTGAGCGCAAGGAGAAACTGAAAACCCGTTGGGCGCAGCTTGAGGCGGTGGTTGGCTCCGAGAACCGCATCAAGCTCGTCGCCCGCGACCTGGTGGAGCACTTCGAGAACCGGCTCGCGACGATGGACGGCAAGGCGATGGTGGTGGCGATGAGCCGCCGCATCGCGGTGGGGCTCTATAAGGAGCTGGTGGCGTTGCGTCCGGCGTGGCACGGTGAGGATGACGAGCATGGCGCGCTGAAAGTCGTGATGACCGGCTCAGCCTCGGACCCGCTTGACTGGCAGCAGCACATTCGCAACAAGAAACGCCGCGAAACACTGGCCAACCGCTTTCGCGAGGCTAAAGATCCCTTCCAGATCGTGATCGTGCGCGACATGTGGCTTACCGGCTTCGACGCGCCATCTCTGCATACCATGTACGTGGACAAGCCGATGCGCGGACACGGGCTGATGCAGGCCATCGCTCGCGTCAACCGCGTGTTCAAAGACAAGCCCGGTGGATTGGTGGTGGATTACCTGGGCCTCGCCGACGAGTTGAAAAAGGCGCTGGCGACGTACACGGAGGCGGGCGGCACCGGAAAGACAGCGCTCGATCAGGCCGAAGCCGTAGCAGTGATGCTGGAGAAATACGAAATCTGCCGTGGTCTCTTCCATGGTTTTGACTGGAAGCATTGGACGTCCGGAACGCCGCAGAACCGCCTGTCGCTGCTTCCCGCCGCGCAGGAGCACATCCTTGCCCAGAACGACGGCAAGGCGCGGCTGCTGCGCGCGGTGACAGAGTTGGGCCAGGCCTTCGCACTCGCAGTACCGCACGAGGCGGCACTGGAAATCCGCGACGATGTAGGGTTCTTCCAGGCCGTGCGGGCGGTGCTGGCGAAGGGGACGCCTGGTGAGCAGAAGACCGACGAGGAACTGGAACACGCCATCCGGCAGATTATTTCCAGAGCGGTGGTCTCCGATGGTGTGATCGACATCTTCGCCGCCGCCGGCCTCAAGAAGCCGGACATCTCCATCCTGTCGGACGAGTTTCTGACCGAGGTACGCGGCATGCCGCAGAGGAACCTGGCCGTGGAGCTGTTGCACAAGCTGCTGAAAGGGGAGATCAGGGCCCGCTCGAAGCGAAACGTGGTGCAGGGACGCTCCTTCGCCGAGTTGCTGGAGCAGGCGATTCGCAAGTATCAAAATCGCGCGATTGAGACGGCGCAGGTGATTGAGGAACTGATTCGGCTTGCGAAAGACATGCGCGCCGCGAACGCACGCGGCGAGGAGTTGCACCTGAGCGAAGACGAGTTGGCGTTCTACGACGCGCTGGAAGTCAACAACAGCGCGGTCAAGGTCCTCGGCGAGCCAACGCTGGTCAAGATCGCTCGCGAGTTGGTGGAAACCGTGAAGAAGAACGTCACCATCGACTGGACGGTGCGAGACAACGTGCGCGCGCAGCTGCGGGTCATCGTCAAACGCATCTTGCGCAAGTATGGCTACCCGCCCGACAAGCAAGAGAAGGCGACGCAGACGGTGCTGGAACAAGCGGAGGTGCTGTCGGAGATTTGGGCGGCAGCGTGA
PROTEIN sequence
Length: 1049
MAGSLTESVVEDAALAWLESLGYAVLHGPDIAVGEPAAERSDPNYRDVVLEGRLRQALARLNPNLPPEALQDAFRKLTRSDAPTLVERNRAVHRMLVDGVTVEFRRKEGSIGGAPAQVIDFDTPDDNDWLAVNQFTVCEGQHNRRPDVVLFVNGLPLAVIELKNPADENATLWSGFQQLQTYQAQIPALFATNAALVVSDGVQARIGALGAGKEWFKPWRTITGREDASARLPELQVVLEGVFERRRFLELLRYFIVFEDSAADGGAGTLVKKMAGYHQFHAVNVAVEETLRAAKVAAQPLGRYAAGHQPGGEEGDRRVGVVWHTQGSGKSLTMAFYAGRVILHPTMANPTIVVLTDRNDLDDQLFGTFARCRDLLRQPPVQAADRADLRAKLAVASGGVVFTTIQKFFPEEKGDRHPVLSERRNIVVIADEAHRSQYDFIDGFARHMRDALPHASFVGFTGTPIEKTDANTRAVFGDYISVYDIQRAVVDGATVPIYYESRLAKLELKQSERPKIDPEFEEATEGEEVERKEKLKTRWAQLEAVVGSENRIKLVARDLVEHFENRLATMDGKAMVVAMSRRIAVGLYKELVALRPAWHGEDDEHGALKVVMTGSASDPLDWQQHIRNKKRRETLANRFREAKDPFQIVIVRDMWLTGFDAPSLHTMYVDKPMRGHGLMQAIARVNRVFKDKPGGLVVDYLGLADELKKALATYTEAGGTGKTALDQAEAVAVMLEKYEICRGLFHGFDWKHWTSGTPQNRLSLLPAAQEHILAQNDGKARLLRAVTELGQAFALAVPHEAALEIRDDVGFFQAVRAVLAKGTPGEQKTDEELEHAIRQIISRAVVSDGVIDIFAAAGLKKPDISILSDEFLTEVRGMPQRNLAVELLHKLLKGEIRARSKRNVVQGRSFAELLEQAIRKYQNRAIETAQVIEELIRLAKDMRAANARGEELHLSEDELAFYDALEVNNSAVKVLGEPTLVKIARELVETVKKNVTIDWTVRDNVRAQLRVIVKRILRKYGYPPDKQEKATQTVLEQAEVLSEIWAAA*