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PLM3_127_b2_sep16_Acidobacteria_56_8

PLM3_127cm_b2_sep2016_Bacteria_56_8
In projects: PLM3_127cm_b2_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p  |  Acidobacteria_All

Consensus taxonomy: Bacteria

Displaying items 451-500 of 685 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM3_127_b2_sep16_scaffold_58067
Domain: Bacteria (75%)
4 2723 bp 53.80 7.16 78.44
PLM3_127_b2_sep16_scaffold_21212 5 3706 bp 56.53 8.38 78.44
PLM3_127_b2_sep16_scaffold_36061
Domain: Bacteria (90.91%)
11 6384 bp 54.90 9.21 78.34
PLM3_127_b2_sep16_scaffold_25576
Species: Candidatus Solibacter usitatus (50%)
4 3886 bp 57.44 8.30 78.28
PLM3_127_b2_sep16_scaffold_13181
Class: Deltaproteobacteria (50%)
4 4868 bp 57.11 7.18 78.27
PLM3_127_b2_sep16_scaffold_12180
Domain: Bacteria (57.14%)
7 5104 bp 56.82 8.88 78.23
PLM3_127_b2_sep16_scaffold_8540
Domain: Bacteria (71.43%)
7 6274 bp 56.69 7.08 78.23
PLM3_127_b2_sep16_scaffold_28834
Species: R_Ignavibacteria_55_14 (66.67%)
3 3108 bp 57.08 7.29 78.19
PLM3_127_b2_sep16_scaffold_93810
Domain: Bacteria (50%)
4 3066 bp 55.09 7.29 78.18
PLM3_127_b2_sep16_scaffold_41033
Domain: Bacteria (66.67%)
6 5146 bp 56.16 8.10 78.12
PLM3_127_b2_sep16_scaffold_33810 7 6155 bp 57.09 6.36 78.08
PLM3_127_b2_sep16_scaffold_19616
Domain: Bacteria (100%)
4 3874 bp 56.32 7.63 78.06
PLM3_127_b2_sep16_scaffold_34926
Species: Methylobacterium aquaticum (50%)
2 2776 bp 56.84 7.56 78.03
PLM3_127_b2_sep16_scaffold_33256
Domain: Bacteria (60%)
5 2857 bp 56.28 8.35 78.02
PLM3_127_b2_sep16_scaffold_7873
Domain: Bacteria (100%)
5 6564 bp 56.63 8.59 77.97
PLM3_127_b2_sep16_scaffold_12066
Domain: Bacteria (50%)
10 8970 bp 57.50 8.51 77.96
PLM3_127_b2_sep16_scaffold_19836
Domain: Bacteria (63.64%)
11 6289 bp 55.48 6.58 77.90
PLM3_127_b2_sep16_scaffold_47271
Phylum: Acidobacteria (66.67%)
3 3799 bp 55.62 8.17 77.86
PLM3_127_b2_sep16_scaffold_34288
Phylum: Acidobacteria (55.56%)
9 7729 bp 58.84 6.79 77.82
PLM3_127_b2_sep16_scaffold_7706
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (57.14%)
7 7618 bp 55.88 7.58 77.78
PLM3_127_b2_sep16_scaffold_12022
Domain: Bacteria (85.71%)
7 7046 bp 56.61 9.35 77.75
PLM3_127_b2_sep16_scaffold_46786
Phylum: Verrucomicrobia (60%)
5 3743 bp 55.78 7.25 77.66
PLM3_127_b2_sep16_scaffold_18374
Species: Candidatus Solibacter usitatus (75%)
4 4027 bp 57.86 7.64 77.48
PLM3_127_b2_sep16_scaffold_25706
Phylum: Acidobacteria (60%)
5 4219 bp 59.23 7.89 77.36
PLM3_127_b2_sep16_scaffold_14224
Phylum: Acidobacteria (60%)
5 4666 bp 55.47 6.40 77.35
PLM3_127_b2_sep16_scaffold_20886
Domain: Bacteria (100%)
6 7404 bp 56.05 8.00 77.31
PLM3_127_b2_sep16_scaffold_7878
Domain: Bacteria (90.91%)
11 12392 bp 56.74 7.92 77.28
PLM3_127_b2_sep16_scaffold_43909
Domain: Bacteria (66.67%)
3 2936 bp 58.00 9.15 77.25
PLM3_127_b2_sep16_scaffold_7909
Domain: Bacteria (83.33%)
6 6546 bp 57.84 8.41 77.22
PLM3_127_b2_sep16_scaffold_39812
Species: Candidatus Solibacter usitatus (50%)
4 2573 bp 57.75 7.75 77.07
PLM3_127_b2_sep16_scaffold_28509
Phylum: Acidobacteria (50%)
6 4925 bp 55.01 8.04 77.06
PLM3_127_b2_sep16_scaffold_27838
Domain: Bacteria (84.62%)
13 9837 bp 55.75 7.44 77.04
PLM3_127_b2_sep16_scaffold_16502
Phylum: Acidobacteria (66.67%)
6 7717 bp 55.88 9.39 77.01
PLM3_127_b2_sep16_scaffold_63464
Phylum: Proteobacteria (75%)
8 5116 bp 55.98 5.42 76.99
PLM3_127_b2_sep16_scaffold_63729
Species: Candidatus Solibacter usitatus (50%)
2 3106 bp 57.66 7.78 76.98
PLM3_127_b2_sep16_scaffold_16897
Phylum: Acidobacteria (50%)
6 4665 bp 56.33 7.97 76.91
PLM3_127_b2_sep16_scaffold_28349
Species: Candidatus Solibacter usitatus (66.67%)
3 3519 bp 59.16 8.95 76.90
PLM3_127_b2_sep16_scaffold_11315
Species: RLO_Gemmatimonadetes_68_9 (66.67%)
3 5324 bp 56.37 7.41 76.86
PLM3_127_b2_sep16_scaffold_63179
Phylum: Acidobacteria (66.67%)
3 4079 bp 55.77 6.44 76.78
PLM3_127_b2_sep16_scaffold_56279
Order: Acidobacteriales (66.67%)
3 3197 bp 55.27 8.30 76.67
PLM3_127_b2_sep16_scaffold_24093 7 6784 bp 53.73 8.76 76.64
PLM3_127_b2_sep16_scaffold_22767
Species: uncultured Acidobacteria bacterium A2 (50%)
2 3557 bp 59.12 7.93 76.58
PLM3_127_b2_sep16_scaffold_30940
Phylum: Acidobacteria (50%)
4 4321 bp 55.98 9.30 76.58
PLM3_127_b2_sep16_scaffold_86932
Phylum: Chloroflexi (66.67%)
3 2851 bp 55.42 7.05 76.50
PLM3_127_b2_sep16_scaffold_14504
Phylum: Acidobacteria (54.55%)
11 8003 bp 52.61 8.45 76.47
PLM3_127_b2_sep16_scaffold_23602
Domain: Bacteria (88.89%)
9 6773 bp 55.90 8.95 76.32
PLM3_127_b2_sep16_scaffold_11596
Phylum: Acidobacteria (50%)
6 6377 bp 55.53 7.95 76.31
PLM3_127_b2_sep16_scaffold_37587
Domain: Bacteria (83.33%)
6 6304 bp 58.12 8.97 76.24
PLM3_127_b2_sep16_scaffold_30028
Domain: Bacteria (66.67%)
6 5141 bp 57.54 8.34 76.15
PLM3_127_b2_sep16_scaffold_58942
Domain: Bacteria (80%)
5 4700 bp 53.53 9.32 76.15
Displaying items 451-500 of 685 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.