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PLM3_127_b2_sep16_Acidobacteria_56_8

PLM3_127cm_b2_sep2016_Bacteria_56_8
In projects: PLM3_127cm_b2_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p  |  Acidobacteria_All

Consensus taxonomy: Bacteria

Displaying items 151-200 of 685 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM3_127_b2_sep16_scaffold_3892
Domain: Bacteria (87.5%)
8 10673 bp 58.22 8.73 89.36
PLM3_127_b2_sep16_scaffold_15063
Phylum: Acidobacteria (71.43%)
7 9051 bp 55.15 8.72 80.05
PLM3_127_b2_sep16_scaffold_14498
Domain: Bacteria (83.33%)
6 4616 bp 55.55 8.71 71.30
PLM3_127_b2_sep16_scaffold_19880
Species: R_Acidobacteria_61_28 (66.67%)
3 3847 bp 56.88 8.70 92.72
PLM3_127_b2_sep16_scaffold_13438
Domain: Bacteria (57.14%)
7 5467 bp 58.95 8.70 96.36
PLM3_127_b2_sep16_scaffold_40056
Species: Pyrinomonas methylaliphatogenes (66.67%)
3 4485 bp 57.75 8.70 85.15
PLM3_127_b2_sep16_scaffold_29515
Domain: Bacteria (71.43%)
7 5675 bp 55.65 8.70 81.04
PLM3_127_b2_sep16_scaffold_39442
Species: R_Acidobacteria_60_20 (50%)
4 2587 bp 56.13 8.70 87.79
PLM3_127_b2_sep16_scaffold_20786
Phylum: Acidobacteria (57.14%)
7 7950 bp 55.87 8.68 85.28
PLM3_127_b2_sep16_scaffold_28994
Phylum: Acidobacteria (50%)
4 3098 bp 56.81 8.67 90.45
PLM3_127_b2_sep16_scaffold_13482
Domain: Bacteria (100%)
5 4810 bp 56.78 8.67 84.64
PLM3_127_b2_sep16_scaffold_53398
Species: RLO_Deltaproteobacteria_60_19 (50%)
2 2666 bp 55.10 8.66 50.64
PLM3_127_b2_sep16_scaffold_14244
Species: R_Acidobacteria_61_28 (66.67%)
3 4664 bp 52.77 8.65 98.35
PLM3_127_b2_sep16_scaffold_32865
Domain: Bacteria (66.67%)
6 5756 bp 55.42 8.65 60.72
PLM3_127_b2_sep16_scaffold_26414
Domain: Bacteria (83.33%)
6 4872 bp 55.36 8.65 82.45
PLM3_127_b2_sep16_scaffold_36399 5 4775 bp 58.95 8.64 75.33
PLM3_127_b2_sep16_scaffold_11346
Phylum: Acidobacteria (77.78%)
9 5317 bp 52.81 8.63 88.08
PLM3_127_b2_sep16_scaffold_26327
Phylum: Acidobacteria (50%)
6 5458 bp 55.19 8.63 82.83
PLM3_127_b2_sep16_scaffold_85261
Domain: Bacteria (60%)
5 4263 bp 56.18 8.62 62.49
PLM3_127_b2_sep16_scaffold_26353
Species: R_Acidobacteria_61_28 (66.67%)
3 3273 bp 53.59 8.62 72.14
PLM3_127_b2_sep16_scaffold_21673
Domain: Bacteria (100%)
3 3662 bp 57.10 8.60 88.07
PLM3_127_b2_sep16_scaffold_13815
Domain: Bacteria (80%)
5 4746 bp 55.77 8.60 62.90
PLM3_127_b2_sep16_scaffold_6457
Domain: Bacteria (85.71%)
7 7309 bp 53.35 8.60 70.06
PLM3_127_b2_sep16_scaffold_7873
Domain: Bacteria (100%)
5 6564 bp 56.63 8.59 77.97
PLM3_127_b2_sep16_scaffold_15621
Domain: Bacteria (71.43%)
7 6009 bp 57.21 8.59 83.77
PLM3_127_b2_sep16_scaffold_18071
Species: uncultured marine bacterium PPT_M2 (66.67%)
9 6006 bp 53.68 8.59 81.12
PLM3_127_b2_sep16_scaffold_43220
Domain: Bacteria (66.67%)
6 5645 bp 55.57 8.58 85.51
PLM3_127_b2_sep16_scaffold_5675
Phylum: Acidobacteria (57.14%)
14 11328 bp 52.76 8.55 92.29
PLM3_127_b2_sep16_scaffold_17202
Domain: Bacteria (77.78%)
9 9576 bp 57.92 8.55 82.58
PLM3_127_b2_sep16_scaffold_51693
Domain: Bacteria (77.78%)
9 5631 bp 55.60 8.55 89.77
PLM3_127_b2_sep16_scaffold_5124
Domain: Bacteria (100%)
10 9427 bp 57.39 8.54 86.46
PLM3_127_b2_sep16_scaffold_25439 5 3336 bp 52.28 8.54 81.92
PLM3_127_b2_sep16_scaffold_44324
Species: Singulisphaera acidiphila (66.67%)
3 3033 bp 58.03 8.51 94.86
PLM3_127_b2_sep16_scaffold_12066
Domain: Bacteria (50%)
10 8970 bp 57.50 8.51 77.96
PLM3_127_b2_sep16_scaffold_12730
Domain: Bacteria (80%)
10 14744 bp 56.23 8.51 84.52
PLM3_127_b2_sep16_scaffold_76979
Domain: Bacteria (60%)
5 3754 bp 56.07 8.51 57.22
PLM3_127_b2_sep16_scaffold_4385
Domain: Bacteria (88.24%)
17 20632 bp 56.84 8.49 73.88
PLM3_127_b2_sep16_scaffold_39551
Phylum: Acidobacteria (60%)
5 3360 bp 58.01 8.48 79.91
PLM3_127_b2_sep16_scaffold_29276
Phylum: Acidobacteria (100%)
5 3082 bp 54.12 8.47 92.18
PLM3_127_b2_sep16_scaffold_21691
Phylum: Acidobacteria (57.14%)
7 5400 bp 58.81 8.47 89.78
PLM3_127_b2_sep16_scaffold_7064 7 6964 bp 51.90 8.46 84.91
PLM3_127_b2_sep16_scaffold_25250
Order: Acidobacteriales (50%)
8 4182 bp 56.31 8.46 86.23
PLM3_127_b2_sep16_scaffold_14504
Phylum: Acidobacteria (54.55%)
11 8003 bp 52.61 8.45 76.47
PLM3_127_b2_sep16_scaffold_16011
Domain: Bacteria (75%)
4 4366 bp 56.34 8.45 87.61
PLM3_127_b2_sep16_scaffold_50165
Species: RLO_RIF03_38_15 (50%)
4 5039 bp 57.05 8.45 84.48
PLM3_127_b2_sep16_scaffold_12719
Domain: Bacteria (75%)
8 7151 bp 55.08 8.43 80.80
PLM3_127_b2_sep16_scaffold_39251
Phylum: Acidobacteria (60%)
5 4273 bp 56.92 8.42 85.44
PLM3_127_b2_sep16_scaffold_45295
Phylum: Acidobacteria (60%)
5 4080 bp 56.96 8.42 84.04
PLM3_127_b2_sep16_scaffold_7909
Domain: Bacteria (83.33%)
6 6546 bp 57.84 8.41 77.22
PLM3_127_b2_sep16_scaffold_68535
Phylum: Acidobacteria (66.67%)
3 2804 bp 53.46 8.40 79.60
Displaying items 151-200 of 685 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.