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PLM3_127_b2_sep16_Acidobacteria_56_8

PLM3_127cm_b2_sep2016_Bacteria_56_8
In projects: PLM3_127cm_b2_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p  |  Acidobacteria_All

Consensus taxonomy: Bacteria

Displaying items 301-350 of 685 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM3_127_b2_sep16_scaffold_16164
Phylum: Acidobacteria (57.14%)
7 5154 bp 51.57 6.43 80.91
PLM3_127_b2_sep16_scaffold_118556
Domain: Bacteria (100%)
3 2751 bp 55.91 6.38 80.92
PLM3_127_b2_sep16_scaffold_22856
Order: Planctomycetales (50%)
4 3549 bp 57.23 7.27 80.98
PLM3_127_b2_sep16_scaffold_29515
Domain: Bacteria (71.43%)
7 5675 bp 55.65 8.70 81.04
PLM3_127_b2_sep16_scaffold_5562
Domain: Bacteria (58.33%)
12 9514 bp 55.89 7.63 81.07
PLM3_127_b2_sep16_scaffold_16912
Domain: Bacteria (83.33%)
6 4866 bp 55.86 8.26 81.07
PLM3_127_b2_sep16_scaffold_9737
Domain: Bacteria (88.89%)
9 11815 bp 56.34 8.21 81.07
PLM3_127_b2_sep16_scaffold_18071
Species: uncultured marine bacterium PPT_M2 (66.67%)
9 6006 bp 53.68 8.59 81.12
PLM3_127_b2_sep16_scaffold_36636
Phylum: Acidobacteria (62.5%)
8 7761 bp 54.37 8.29 81.12
PLM3_127_b2_sep16_scaffold_30352
Domain: Bacteria (90.91%)
11 7462 bp 56.93 6.94 81.13
PLM3_127_b2_sep16_scaffold_23715
Domain: Bacteria (80%)
10 6430 bp 54.79 8.30 81.18
PLM3_127_b2_sep16_scaffold_33365
Domain: Bacteria (66.67%)
6 5157 bp 55.54 6.81 81.27
PLM3_127_b2_sep16_scaffold_3960
Domain: Bacteria (68.75%)
16 15986 bp 56.87 7.88 81.31
PLM3_127_b2_sep16_scaffold_21948 8 6130 bp 54.94 8.27 81.34
PLM3_127_b2_sep16_scaffold_22477
Phylum: Acidobacteria (50%)
8 3585 bp 51.99 8.87 81.34
PLM3_127_b2_sep16_scaffold_58273
Class: Betaproteobacteria (50%)
4 3509 bp 58.51 7.31 81.39
PLM3_127_b2_sep16_scaffold_26850
Species: Candidatus Solibacter usitatus (100%)
3 5721 bp 58.22 6.95 81.44
PLM3_127_b2_sep16_scaffold_4131
Phylum: Acidobacteria (52.94%)
17 14731 bp 54.25 7.90 81.44
PLM3_127_b2_sep16_scaffold_15960
Domain: Bacteria (83.33%)
6 6571 bp 56.98 7.26 81.45
PLM3_127_b2_sep16_scaffold_38435
Domain: Bacteria (100%)
5 4587 bp 57.82 7.26 81.49
PLM3_127_b2_sep16_scaffold_40984
Domain: Bacteria (66.67%)
3 3394 bp 56.54 11.36 81.50
PLM3_127_b2_sep16_scaffold_19129 12 8742 bp 54.85 6.90 81.57
PLM3_127_b2_sep16_scaffold_11160
Phylum: Acidobacteria (62.5%)
8 8958 bp 56.41 7.79 81.61
PLM3_127_b2_sep16_scaffold_10705
Domain: Bacteria (75%)
4 5499 bp 57.37 7.88 81.61
PLM3_127_b2_sep16_scaffold_15056
Domain: Bacteria (80%)
5 6597 bp 56.45 7.19 81.63
PLM3_127_b2_sep16_scaffold_14493
Domain: Bacteria (85.71%)
7 10485 bp 55.09 7.70 81.69
PLM3_127_b2_sep16_scaffold_42237
Domain: Bacteria (100%)
5 4004 bp 56.04 7.72 81.82
PLM3_127_b2_sep16_scaffold_11220
Domain: Bacteria (75%)
8 8931 bp 55.51 6.94 81.83
PLM3_127_b2_sep16_scaffold_14012
Domain: Bacteria (100%)
6 6886 bp 58.50 7.47 81.91
PLM3_127_b2_sep16_scaffold_33352
Species: R_Acidobacteria_67_28 (50%)
2 2853 bp 53.56 9.31 81.91
PLM3_127_b2_sep16_scaffold_25439 5 3336 bp 52.28 8.54 81.92
PLM3_127_b2_sep16_scaffold_20856
Domain: Bacteria (71.43%)
7 5870 bp 54.80 6.59 81.93
PLM3_127_b2_sep16_scaffold_24109
Domain: Bacteria (87.5%)
8 6554 bp 56.79 8.93 81.93
PLM3_127_b2_sep16_scaffold_43144
Phylum: Acidobacteria (100%)
3 2793 bp 57.68 8.16 81.95
PLM3_127_b2_sep16_scaffold_20143
Species: R_Acidobacteria_61_28 (71.43%)
7 4721 bp 54.31 7.91 81.97
PLM3_127_b2_sep16_scaffold_6605
Domain: Bacteria (100%)
5 7213 bp 55.05 7.76 81.98
PLM3_127_b2_sep16_scaffold_13791
Domain: Bacteria (55.56%)
9 8871 bp 55.66 8.27 82.08
PLM3_127_b2_sep16_scaffold_43658
Domain: Bacteria (71.43%)
7 5059 bp 57.01 8.09 82.13
PLM3_127_b2_sep16_scaffold_19392
Domain: Bacteria (57.14%)
7 4568 bp 57.46 6.96 82.16
PLM3_127_b2_sep16_scaffold_25858
Species: GWA2_RIF03_38_11_curated (100%)
1 3308 bp 55.99 7.84 82.16
PLM3_127_b2_sep16_scaffold_11532
Phylum: Acidobacteria (66.67%)
6 6049 bp 54.47 7.76 82.18
PLM3_127_b2_sep16_scaffold_30778
Domain: Bacteria (100%)
5 4259 bp 58.04 7.01 82.20
PLM3_127_b2_sep16_scaffold_39768
Domain: Bacteria (100%)
3 2575 bp 58.76 7.75 82.25
PLM3_127_b2_sep16_scaffold_28799
Phylum: Proteobacteria (66.67%)
3 3110 bp 56.59 5.84 82.28
PLM3_127_b2_sep16_scaffold_37417
Phylum: Acidobacteria (100%)
3 6636 bp 56.95 5.74 82.32
PLM3_127_b2_sep16_scaffold_7857
Phylum: Nitrospirae (66.67%)
3 6571 bp 57.05 7.72 82.41
PLM3_127_b2_sep16_scaffold_11316
Phylum: Acidobacteria (53.85%)
13 13046 bp 55.62 8.37 82.44
PLM3_127_b2_sep16_scaffold_26414
Domain: Bacteria (83.33%)
6 4872 bp 55.36 8.65 82.45
PLM3_127_b2_sep16_scaffold_17202
Domain: Bacteria (77.78%)
9 9576 bp 57.92 8.55 82.58
PLM3_127_b2_sep16_scaffold_7824
Phylum: Acidobacteria (70%)
10 10676 bp 55.67 7.63 82.59
Displaying items 301-350 of 685 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.