ggKbase home page

PLM3_127_b2_sep16_scaffold_19930_1

Organism: PLM3_127_b2_sep16_Chloroflexi_Thermoflexia_53_7

near complete RP 50 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 2..1678

Top 3 Functional Annotations

Value Algorithm Source
Cadherin Tax=Halothece sp. (strain PCC 7418) RepID=K9Y9N0_HALP7 similarity UNIREF
DB: UNIREF100
  • Identity: 28.4
  • Coverage: 415.0
  • Bit_score: 161
  • Evalue 2.40e-36
cadherin similarity KEGG
DB: KEGG
  • Identity: 24.9
  • Coverage: 587.0
  • Bit_score: 166
  • Evalue 1.20e-38
Cadherin {ECO:0000313|EMBL:AFZ42798.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strain PCC 7418) (Synechococcus sp. (strain PCC 7418)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.4
  • Coverage: 415.0
  • Bit_score: 161
  • Evalue 3.40e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halothece sp. PCC 7418 → Halothece → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 1677
GAGCCTTGTCAAGATACCAAGTTGCTGGTCGAACCGGCCACCCAGCAGGGTGGGCGACTGGTCAATACTTTGGCCGGGGTCAATCCGACGGGCGAAGCTCCCTTGACCGAAGCTATTGTTCAGGCCATTGGCGATTTTGACCTGACCCGCGATACCAAAAATACCCTCATCATCATCACTGCCGGTCTTGATACCTGCGAGGCAAACGCCGTTGAGCAATTGGAGACCCTCAGCCGCCGCTTGGGCTTTGAATTTGATTTACAATTGATTGGCTTGGGCGTGACCAGCGAAGGGGACCGGATTCAACTCCAGCAAATGGCCGAGGCCGCCGGCGGCCAATACCACGACGCCCAAAATGAGGAGGATATTCGGCGGGTGGTGGCGCAGGAGGTGGCCAAACTGCCTGATGCGCCAGTGCTTACACCTTCTCAGGGAGAAGCGGGTACGCTGACCGGTGAGGGAGCTATTCCGCTGGGGCAATTCATCGCTGGCGAAATTACCTCTCCTGAAGATACGGCGAGCTACACGTTTGAAGCGGCCGCCGGGCAGAGTATCTATTTTCACGTCGAATCCACGAGCGAGGGCACTTATTTCAACCTCTTGGCGCCGGATGGACGAACCCAGGTGTTCAGCGTCTACAACAGCGATCAAGGGCCAGTAGTGCTGGAAGAGGCGGGGACGTATACCTTGATTGTTGATCCAGATGGTGAAAATGTGCCCACCTATGAGTTTATTATCTGGGACATCAATCCGCCGGTCGTCGAGGGTGGGTCCATCGAGTTTGGCAAGTTTGTCAGCGGGGAGCTTAAGACGCCCGGTCAGACAGCCAGCTACACCTTTGAAGGGCAGGCGGAGCAAAGTATTTACTTTGACGCGCAGTCCATCAGCGAGGGTACTTATTTCATTCTCACTGCGCCTGATGGACGGACCGAGGTTTTCAATATCTATAACAATGATCAAGGGCCAGTGGTGCTGGAGCAAGCAGGAACCTATACCTTGCTTGTTGACCCGGATAGCGCCAATAAGCCCACCTATGAATTTATCATCTGGGATATCAATCCACCGGTCGTTGAAGGTGGACCGATAGAGCTTGGCAACTTTGTCAGCGGAGAGCTTAAAATCCCCGGTCAGACGGCAGTCTATACCTTTGAGGGGGAGGCAGAGCAAAGTATTTACTTTGACGCGCAGTCCATCAGTGAAGGCACGTATTTCATTCTCACTGCGCCTGATGGACGGACCGAGGTGTTCAATATCTACAACAATGACCAAGGGCCAGTGGTGCTGGAACAGGCAGGGGCGTATACCTTGGTAGTTGACCCAGATAGCGCCAACAAGCCTACCTATGAGTTTATCGTCTGGGACATTGATCCGCCAGTCGTTGAGGGTGGGCCGATAGAGTTCGGTGCGTTTGTCAATGGGGAGATTAAAATCCCTGGCCAGACGGCAGTGTACACGTTCGAAGGGACTGCTGGGCAGACCATCTTTTTTGACGTGCAAACTACGAGTGAAGGCACGTACTTTAACCTCATTGCACCTGATGGGCGGACGGAGGTGTTCAGTGTCTACAACAACGATCAAGGGCCGTTGGCGTTAGAGGCCACTGGAACGTACACCTTGGTGGTTGATCCAGACAGCGCCAATAGGCCAACCTATGAGTTTACCATCAGCTTGCATTAA
PROTEIN sequence
Length: 559
EPCQDTKLLVEPATQQGGRLVNTLAGVNPTGEAPLTEAIVQAIGDFDLTRDTKNTLIIITAGLDTCEANAVEQLETLSRRLGFEFDLQLIGLGVTSEGDRIQLQQMAEAAGGQYHDAQNEEDIRRVVAQEVAKLPDAPVLTPSQGEAGTLTGEGAIPLGQFIAGEITSPEDTASYTFEAAAGQSIYFHVESTSEGTYFNLLAPDGRTQVFSVYNSDQGPVVLEEAGTYTLIVDPDGENVPTYEFIIWDINPPVVEGGSIEFGKFVSGELKTPGQTASYTFEGQAEQSIYFDAQSISEGTYFILTAPDGRTEVFNIYNNDQGPVVLEQAGTYTLLVDPDSANKPTYEFIIWDINPPVVEGGPIELGNFVSGELKIPGQTAVYTFEGEAEQSIYFDAQSISEGTYFILTAPDGRTEVFNIYNNDQGPVVLEQAGAYTLVVDPDSANKPTYEFIVWDIDPPVVEGGPIEFGAFVNGEIKIPGQTAVYTFEGTAGQTIFFDVQTTSEGTYFNLIAPDGRTEVFSVYNNDQGPLALEATGTYTLVVDPDSANRPTYEFTISLH*