ggKbase home page

PLM3_127_b2_sep16_scaffold_23789_1

Organism: PLM3_127_b2_sep16_Chloroflexi_Thermoflexia_53_7

near complete RP 50 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(1..774)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4Z5_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 52.0
  • Coverage: 256.0
  • Bit_score: 261
  • Evalue 4.60e-67
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFH81575.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 256.0
  • Bit_score: 261
  • Evalue 6.50e-67
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 255.0
  • Bit_score: 247
  • Evalue 3.30e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ktedonobacter racemifer → Ktedonobacter → Ktedonobacterales → Ktedonobacteria → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 774
ATGAATATCGAGCAATTCCAGCAGTATCGCCCCCTCCTCTTTTCAATTGCCTATCGCATGTTGGGCAGTGTGGCCGAGGCGGAAGATGTGTTACAAGATGCCTACTTGCGGGTTCAAGGACACACCTCTGAAACTATCGAACAGCCAAAGTATTACCTGACCACTATCGTGACCCGCCTCTGTCTTAACCAGCTCAGTGCAGCCAGAACACAACGGGAGCAGTACCTGGGGCCGTGGCTGCCCGAACCCATTCTAACGGAAGATAAACCCGAACTGGTCAACCCTGTTGAGCAGGTAGTAACCCACGACTCCATCTCTATCGCCTTTCTTATTTTGCTGGAATCACTGTTACCCGCCGAGCGAGCGGTATTCCTGCTGCACGAAGTATTTGAATATAAGTATCGGGAGATTGCCGCCATGCTGGGCAAGAGTGAAGCCGCCTGCCGCCAACTTTTTCGGCGGGCCAAAGGTCACATCGCCGAAAATCGGCCTCGCTTTAAGGCCACCCCGCAACAGCACGAACGTTTATTGCATAGTTTTATCAAAGTGGTAGAGTTGGGAGAACTGGACTCCTTTTTGCAACTCCTGGCCGACGATGTAAGCTTGCTCCCTGATGGTGGGGGTGAGCGCGGCGCAGCGATCCGGGTGTTACATGGGCGGGATGCGGTGGCTGCGTTTATTATGGGAACGTACCGACTTGCCCCGAAAAATCTTCAGTACGGCCTGACGATGCTCAATGGGCAACAAGCAATTCTGGCTCGTACGGCGGATGGA
PROTEIN sequence
Length: 258
MNIEQFQQYRPLLFSIAYRMLGSVAEAEDVLQDAYLRVQGHTSETIEQPKYYLTTIVTRLCLNQLSAARTQREQYLGPWLPEPILTEDKPELVNPVEQVVTHDSISIAFLILLESLLPAERAVFLLHEVFEYKYREIAAMLGKSEAACRQLFRRAKGHIAENRPRFKATPQQHERLLHSFIKVVELGELDSFLQLLADDVSLLPDGGGERGAAIRVLHGRDAVAAFIMGTYRLAPKNLQYGLTMLNGQQAILARTADG