ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

PLM3_127_b2_sep16_scaffold_24269_6

Organism: PLM3_127_b2_sep16_Chloroflexi_Thermoflexia_53_7

near complete RP 50 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(2928..3320)

Top 3 Functional Annotations

Value Algorithm Source
OmpR family two-component response regulator Tax=Firmicutes bacterium CAG:103 RepID=R5ATM0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 35.9
  • Coverage: 117.0
  • Bit_score: 75
  • Evalue 3.10e-11
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 34.4
  • Coverage: 122.0
  • Bit_score: 72
  • Evalue 5.70e-11
Tax=BJP_IG2157_Anaerolineales_55_23 similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 120.0
  • Bit_score: 115
  • Evalue 3.80e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_IG2157_Anaerolineales_55_23 → Anaerolineales → Anaerolineae → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 393
ATGACCGAGTCGCCCGCAGTTAAGAACCCCTTGGCTTTCATTATCGAAGACAACGAGTCTGTGGCAGAGGTCTTCCAGGTAGCTTTAGAGCGGGCCCAGTTTGAAATCGAACTCATCCAAGATGGTCGCACTGCTTTGGATCGGCTGGCTGTTGCCACTCCCGCGCTCATACTTTTAGACTTACATTTGCCTTATGTTTCAGGCGAGGAAATTCTACGCTACATTCGTACTGAGCAACGACTGGCTGAGACTCGGGTCATATTGGCCACTGCTGACCTACTGAAGGCTAAAAGCCTTGAGCACGAGGCTGACTTTGTTCTCGTCAAACCTTTTGGTTTCATTCAGTTGCACGAGTTGGCTAAGCAACTGCGCCTCTCTTTAGCTAATATCTAG
PROTEIN sequence
Length: 131
MTESPAVKNPLAFIIEDNESVAEVFQVALERAQFEIELIQDGRTALDRLAVATPALILLDLHLPYVSGEEILRYIRTEQRLAETRVILATADLLKAKSLEHEADFVLVKPFGFIQLHELAKQLRLSLANI*