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PLM3_127_b2_sep16_Chloroflexi_Thermoflexia_53_7

PLM3_127cm_b2_sep2016_Bacteria_53_7
In projects: PLM3_127cm_b2_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: Bacteria

Metagenomic Context

Parent: PLM3_127cm_b2_sep2016_UNK Curated version: PLM3_127_b2_sep16_CONCOCT_105_curated

Properties

Avg. coverage: 7.38 Longest contig: 24.32 Kbp Bin length: 5.06 Mbp GC content: 52.63 %
Contigs count: 983 Features count: 5403 rRNAs count: 1 tRNAs count: 37

Genome completeness

near complete RP 50 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 1
Displaying items 901-950 of 983 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM3_127_b2_sep16_scaffold_31565
Species: RBG_16_Chloroflexi_48_8_curated (50%)
2 2949 bp 58.02 7.17 90.03
PLM3_127_b2_sep16_scaffold_28142
Species: RBG_16_Deltaproteobacteria_49_23_curated (50%)
2 3153 bp 54.39 12.89 85.25
PLM3_127_b2_sep16_scaffold_33470
Species: RBG_19FT_COMBO_Chloroflexi_55_16_curated (50%)
2 2847 bp 51.81 7.64 88.94
PLM3_127_b2_sep16_scaffold_38913
Species: RifOxyA12_full_Elusimicrobia_57_11_curated (50%)
2 2608 bp 52.07 7.07 96.86
PLM3_127_b2_sep16_scaffold_33987
Species: RBG_16_Chloroflexi_56_8_curated (50%)
2 2821 bp 53.14 6.38 92.63
PLM3_127_b2_sep16_scaffold_17055
Species: Bifidobacterium pseudolongum (50%)
2 4517 bp 55.39 7.27 88.86
PLM3_127_b2_sep16_scaffold_77647
Species: RBG_16_Chloroflexi_57_9_curated (50%)
2 2844 bp 49.72 7.54 79.01
PLM3_127_b2_sep16_scaffold_30007
Species: Bacillus akibai (50%)
2 3038 bp 52.37 7.01 93.91
PLM3_127_b2_sep16_scaffold_15699
Species: RIFOXYD2_FULL_Planctomycetes_41_16_curated (50%)
2 4416 bp 55.05 10.90 91.30
PLM3_127_b2_sep16_scaffold_41278
Species: RBG_16_Actinobacteria_67_10_curated (50%)
2 4286 bp 55.16 7.94 95.54
PLM3_127_b2_sep16_scaffold_40743
Species: R_Acidobacteria_65_29 (50%)
2 2539 bp 54.82 5.67 88.97
PLM3_127_b2_sep16_scaffold_34618
Species: RIFOXYB12_FULL_Lentisphaerae_65_16_curated (50%)
2 2790 bp 60.86 6.45 96.45
PLM3_127_b2_sep16_scaffold_35219
Species: RIFOXYC2_FULL_WOR_1_41_25_curated (50%)
2 2763 bp 50.27 4.89 87.95
PLM3_127_b2_sep16_scaffold_23701
Species: Roseiflexus sp. RS-1 (50%)
2 3475 bp 52.60 6.86 96.69
PLM3_127_b2_sep16_scaffold_23193
Species: CG_Anaero_02 (50%)
2 3520 bp 54.91 7.20 96.22
PLM3_127_b2_sep16_scaffold_114014
Species: Bradyrhizobium oligotrophicum (50%)
2 2571 bp 50.02 8.46 82.85
PLM3_127_b2_sep16_scaffold_24088
Species: RBG_16_Chloroflexi_54_18_curated (50%)
2 3442 bp 56.45 7.19 91.69
PLM3_127_b2_sep16_scaffold_23721
Species: Caldilinea aerophila (50%)
2 3474 bp 55.61 7.25 95.42
PLM3_127_b2_sep16_scaffold_28203
Species: RBG_16_Chloroflexi_60_22_curated (50%)
2 3149 bp 51.03 8.72 84.31
PLM3_127_b2_sep16_scaffold_27699
Species: RBG_19FT_COMBO_Chloroflexi_55_16_curated (50%)
2 3182 bp 52.77 7.59 93.05
PLM3_127_b2_sep16_scaffold_29712
Species: Tolypothrix campylonemoides (50%)
2 3055 bp 53.32 8.99 95.94
PLM3_127_b2_sep16_scaffold_32331
Species: Anaerolinea thermophila (50%)
2 3572 bp 54.54 6.13 96.75
PLM3_127_b2_sep16_scaffold_69748
Species: RBG_16_RIF_CHLX_70_13_curated (50%)
2 3065 bp 57.32 6.31 55.50
PLM3_127_b2_sep16_scaffold_86145
Species: R_Nitrospirae_66_17 (50%)
2 2610 bp 60.11 5.80 96.78
PLM3_127_b2_sep16_scaffold_75418 2 3164 bp 52.12 6.07 99.46
PLM3_127_b2_sep16_scaffold_27724
Species: RBG_16_Chloroflexi_63_12_curated (50%)
2 3180 bp 51.57 6.79 82.26
PLM3_127_b2_sep16_scaffold_38745
Species: Caldilinea aerophila (50%)
2 4140 bp 50.29 4.93 68.77
PLM3_127_b2_sep16_scaffold_28747
Species: CG_Anaero_02 (50%)
2 3113 bp 51.30 6.94 82.11
PLM3_127_b2_sep16_scaffold_71331
Species: Herpetosiphon aurantiacus (100%)
2 3097 bp 55.51 6.34 101.81
PLM3_127_b2_sep16_scaffold_34941
Species: Hassallia byssoidea (50%)
2 2775 bp 48.58 6.38 88.32
PLM3_127_b2_sep16_scaffold_15530
Species: Brevibacillus borstelensis (50%)
2 5410 bp 52.74 6.49 73.14
PLM3_127_b2_sep16_scaffold_10482
Species: Paenibacillus mucilaginosus (50%)
2 5563 bp 54.74 6.93 99.50
PLM3_127_b2_sep16_scaffold_35555
Species: RBG_16_Desulfobacca_60_12_curated (50%)
2 2748 bp 52.37 5.95 81.99
PLM3_127_b2_sep16_scaffold_10999
Species: RBG_16_Chloroflexi_63_12_curated (50%)
2 5417 bp 56.43 6.56 95.81
PLM3_127_b2_sep16_scaffold_25658
Species: RBG_16_Chloroflexi_63_12_curated (50%)
2 3321 bp 50.20 9.85 100.00
PLM3_127_b2_sep16_scaffold_30124
Species: uncultured Chloroflexi bacterium (50%)
2 3032 bp 50.10 8.21 99.93
PLM3_127_b2_sep16_scaffold_44462
Species: RBG_16_Chloroflexi_52_11_curated (50%)
2 3189 bp 54.75 6.54 92.76
PLM3_127_b2_sep16_scaffold_41648
Species: RBG_16_Chloroflexi_57_11_curated (50%)
2 2506 bp 56.07 7.30 84.76
PLM3_127_b2_sep16_scaffold_35322
Species: Caldilinea aerophila (50%)
2 2758 bp 53.73 6.80 77.01
PLM3_127_b2_sep16_scaffold_62623
Species: RBG_16_Chloroflexi_57_11_curated (100%)
2 2790 bp 46.49 3.66 71.08
PLM3_127_b2_sep16_scaffold_74715
Species: Nostoc punctiforme (50%)
2 2663 bp 55.24 7.38 68.27
PLM3_127_b2_sep16_scaffold_60335
Species: CG_Anaero_02 (50%)
2 2573 bp 54.22 6.65 81.73
PLM3_127_b2_sep16_scaffold_22831
Species: RBG_13_Chloroflexi_54_9_curated (50%)
2 3551 bp 54.72 5.91 88.20
PLM3_127_b2_sep16_scaffold_39647
Species: CG_Anaero_02 (50%)
2 2579 bp 53.63 8.84 90.50
PLM3_127_b2_sep16_scaffold_27282
Species: Scytonema tolypothrichoides (50%)
2 3211 bp 57.09 8.22 89.60
PLM3_127_b2_sep16_scaffold_37326
Species: Synechococcus sp. PCC 7502 (50%)
2 4760 bp 52.31 6.78 87.04
PLM3_127_b2_sep16_scaffold_24456
Species: GWC2_Chloroflexi_49_37_curated (50%)
2 3411 bp 55.09 6.95 84.52
PLM3_127_b2_sep16_scaffold_69590
Species: CG_Anaero_02 (100%)
2 2857 bp 58.45 8.24 95.66
PLM3_127_b2_sep16_scaffold_75758
Species: Chloroflexus aurantiacus (50%)
2 2895 bp 50.92 7.93 95.13
PLM3_127_b2_sep16_scaffold_81391
Species: CG_Anaero_02 (50%)
2 3058 bp 53.83 7.80 97.32
Displaying items 901-950 of 983 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.