ggKbase home page

PLM3_127_b2_sep16_scaffold_1351_9

Organism: PLM3_127_b2_sep16_Tectomicrobia_60_8

near complete RP 45 / 55 MC: 1 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: 4761..6083

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase ECF-type sigma factor containing TPR repeat Tax=Candidatus Nitrospira defluvii RepID=D8PIT5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 79.1
  • Coverage: 416.0
  • Bit_score: 642
  • Evalue 2.10e-181
putative RNA polymerase ECF-type sigma factor containing TPR repeat similarity KEGG
DB: KEGG
  • Identity: 79.1
  • Coverage: 416.0
  • Bit_score: 642
  • Evalue 6.10e-182
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 417.0
  • Bit_score: 654
  • Evalue 7.60e-185

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1323
ATGATAAGTACGCCGCATCGCTATCATGACGGGCAACCCGCAGGGGCTGCGGACCCGTCGCGCATGCATGAGGACGCGGCCGACCGGGTGCGCGAAAGCGTGGACGCCGTCTACCGCGCCGACTCACGGCGCGTCCTCGCGACGCTGATCCGCCTGCTCGGCGACTTTGACCTCGCCGAGGAGGCGCTGCACGAGGCCTTCACAGTGGCGGTAGAACAATGGTCACGGCATGGTGTGCCGGCCAATCCGCGGGCGTGGCTCATCTCCACTGGCCGCTTCAAGGCGATCGATGGCATGCGGCGACGTGCGCGGGGCGACGCGTCGCTGACGGCACTCGCCAAGCACCTGGCATCCAGCTCTAGTGACGCCGAGGCATGGGACGATAAGAGTATCGAGGACGACCAACTGCGGTTGATCTTCACGTGCTGCCATCCTGCCTTGCCGCCTGATGCCCAAGTGGCGATGACGCTACGCGAAGTCTGCGGCCTCACGACCGATGAGATTGCACGCGCCTTCCTCACGAGGCCGCCCACGATCGCCCAGCGGATCGTGCGCGCCAAGGCGAAGATTCGCCATGCCCGTATTCCCTTTGCAATGCCGGCAGAGACCGATCTGCCGGACAGGCTGGATGCCGTGCTCCGGGTCGTCTACCTCGTGTTCAACGAGGGGTACGCCGCCTCATCCGGTGGGGCGCTGACGCGGCACGATCTCTCGGGCGAGGCGATCCGCCTGGGGCGGTTGCTGATCGAGTTGCTCCCGGAGCCTGAAGCGGTGGGACTCCTGGCGCTGATGTTGTTACATGACTCGCGCCGCGCCGCGCGCACCTCGCCGACGGGCGAGCTGGTGCTCTTGGGCGACCAGGATCGCTCGCGCTGGAACCAGGACCAGATCGTGGAGGGGGCGGCGCTGGTCACACGGGCGCTGTCATCACGTCGCATTGGACCATACACACTCCAAGCGGCGATCGCGGTCGTGCATGCCCAGGCCCCGAGCGCCGCCACGGACTGGGCCCAAATCGTCGGACTCTACGACCTGTTGCTTCACGCCGATCCATCGCCCGTGGTGGAGTTGAATCGCGCTGTCGCGGTGGCGATGCGCGACGGCCCGCTGGCAGGACTTCGCCTCATCGACGCCATCCTTGCGCGCGGTGATCTCGGGAACTATCACCTGGCACACGCGGCACGGGCGGATCTCTGCAGGCGACTCGGGTGCACGGCGGAGGCCCGAGCCTCCTATGCACAAGCCCTGCTCCTCACGCAGCAGGAACCCGAGCGGCGATTTCTCACGCGACGGCTGGCCGAGTTGTCTGATAAGACTGGTTGA
PROTEIN sequence
Length: 441
MISTPHRYHDGQPAGAADPSRMHEDAADRVRESVDAVYRADSRRVLATLIRLLGDFDLAEEALHEAFTVAVEQWSRHGVPANPRAWLISTGRFKAIDGMRRRARGDASLTALAKHLASSSSDAEAWDDKSIEDDQLRLIFTCCHPALPPDAQVAMTLREVCGLTTDEIARAFLTRPPTIAQRIVRAKAKIRHARIPFAMPAETDLPDRLDAVLRVVYLVFNEGYAASSGGALTRHDLSGEAIRLGRLLIELLPEPEAVGLLALMLLHDSRRAARTSPTGELVLLGDQDRSRWNQDQIVEGAALVTRALSSRRIGPYTLQAAIAVVHAQAPSAATDWAQIVGLYDLLLHADPSPVVELNRAVAVAMRDGPLAGLRLIDAILARGDLGNYHLAHAARADLCRRLGCTAEARASYAQALLLTQQEPERRFLTRRLAELSDKTG*