ggKbase home page

PLM3_127_b2_sep16_scaffold_24365_2

Organism: PLM3_127_b2_sep16_Tectomicrobia_60_8

near complete RP 45 / 55 MC: 1 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: comp(1161..1550)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding response regulator bin=bin3_NC10 species=Kocuria atrinae genus=Kocuria taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 129.0
  • Bit_score: 131
  • Evalue 3.60e-28
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.5
  • Coverage: 119.0
  • Bit_score: 105
  • Evalue 7.80e-21
Tax=CSP1_5_NC10 similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 129.0
  • Bit_score: 131
  • Evalue 5.10e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_5_NC10 → NC10 → Bacteria

Sequences

DNA sequence
Length: 390
ATGGAGGTGACCATCTTGATTGTCGATGATAACGCGCGGTTACGTGCGCTCATGCGAGGGATCGCGGCCCAGGAGCCCGACTGCCACGTGGTGGGCGAGGCGGAGGACGGCGCCGAGGCGATTCGCCTGGCCCAGGCACTCCAGCCTGATATCGTGCTGCTGGACCTCGCCATGCCGCGGGTCAACGGCCTGGAGGCCCTGCGGCGGATCAAGGTGGAGCGACCCGAGACCAAGGTCATTATCGTGACCGTGCACGCCGAAGACGCCTATCGCCTGGCGGCAGAGGACAGCGGCGCCGATGCCTTTCTCCTCAAGAAGACGCTCGTGACCGTCCTGCGGCCGACGATCCAGCGCCTGCGTGGTTCCACCTCACCGCCGCAGGCGTCCTGA
PROTEIN sequence
Length: 130
MEVTILIVDDNARLRALMRGIAAQEPDCHVVGEAEDGAEAIRLAQALQPDIVLLDLAMPRVNGLEALRRIKVERPETKVIIVTVHAEDAYRLAAEDSGADAFLLKKTLVTVLRPTIQRLRGSTSPPQAS*