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This organism can only be binned in the context of its binning project 09MI20_z3_2014. Please contact the project owner (amano.yuki@jaea.go.jp) to become a member and gain access.

PLM3_127_b2_sep16_scaffold_26062_3

Organism: PLM3_127_b2_sep16_Tectomicrobia_60_8

near complete RP 45 / 55 MC: 1 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: comp(1332..1640)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein Tax=Acinetobacter lwoffii SH145 RepID=D0SVD6_ACILW similarity UNIREF
DB: UNIREF100
  • Identity: 42.7
  • Coverage: 82.0
  • Bit_score: 60
  • Evalue 8.10e-07
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEY90334.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter lwoffii SH145.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.7
  • Coverage: 82.0
  • Bit_score: 60
  • Evalue 1.10e-06
transcriptional repressor LexA similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 85.0
  • Bit_score: 55
  • Evalue 9.60e-06

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Taxonomy

Acinetobacter lwoffii → Acinetobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGGACATGCAGCGATTTGGGAAGCAGCTGAAGACCTTCAGACAGCAGCGGCGGCTGACCCAGCTGGAGTTGGCGCAGCGCTCTGGGGTGCCCCAGCCGCTGATTTCCGATCTGGAAGCCGGCAAGCGCGAGGGCGTCACCCTCGAAATGGCCTGGCGCCTCGCGCGCGAGCTGTCGGTGAGCCTCGATCACCTCGCGGGTACCTGGGACAAGGCGGAGGAATCCGCACCATCCGCCGCGGAGCCGAAGACGCGGCGCGGCCGCCCGCGCAAGGCCGCGCCCGCGGCGCCCGTTGGCGCCCGTGGCTAA
PROTEIN sequence
Length: 103
MDMQRFGKQLKTFRQQRRLTQLELAQRSGVPQPLISDLEAGKREGVTLEMAWRLARELSVSLDHLAGTWDKAEESAPSAAEPKTRRGRPRKAAPAAPVGARG*