ggKbase home page

PLM3_127_b2_sep16_scaffold_39360_4

Organism: PLM3_127_b2_sep16_Tectomicrobia_60_8

near complete RP 45 / 55 MC: 1 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: comp(2016..2588)

Top 3 Functional Annotations

Value Algorithm Source
Transposase of ISGsu4 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 186.0
  • Bit_score: 218
  • Evalue 4.30e-54
transposase of ISPca4 similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 190.0
  • Bit_score: 211
  • Evalue 1.90e-52
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 190.0
  • Bit_score: 261
  • Evalue 6.20e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_16 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
GAGACGCTGCTCCACCGTCACATGCAGACGACCCCGGAGGCCTTGCTCAACGTCATTGCTCCGTATCGGCCTGCTATCGTCGTCGCGGTCGCATGCCTGTTCACCTGGTACTGGCTCGCCGACCTCTGCGCCGATGACGAGATCCCTTTCGTCCTCGGTCATGCCCTCTCCATGAAGGCCATCCCTGGCGGCAAGGCCAAAAATGACCAGATTGACTCGCACAAGATTGCCGTCTTGCTACGCGGCGGCATGCTCCCGCAGGCGTACGTCTCTCCCGCCGAGATGCGCGCCACCCGCGACCTCCTCCGGCGCCGTATGCCTCTGGCGCACACACGCGGCGAACTCCTCGCGCATGTGCACAACACCAACAGCCAGTATAACCTGCCGACTATTGGCACAAACATCGCTGACAAAGCCAACCGAGACGGGGTGGCTGAACGCTGTGCCGCTCCGGCGGTGCACAAAAGCCTTGAGGTCGACCTCGCACTCGTCTCTTCCGATGATGCGCTGCTGCGCGACGTTGAACTCACCATCGTGAAAACCGCCACACAGCATGACGCCAACACCCTGTAG
PROTEIN sequence
Length: 191
ETLLHRHMQTTPEALLNVIAPYRPAIVVAVACLFTWYWLADLCADDEIPFVLGHALSMKAIPGGKAKNDQIDSHKIAVLLRGGMLPQAYVSPAEMRATRDLLRRRMPLAHTRGELLAHVHNTNSQYNLPTIGTNIADKANRDGVAERCAAPAVHKSLEVDLALVSSDDALLRDVELTIVKTATQHDANTL*