ggKbase home page

PLM3_127_b2_sep16_scaffold_51612_2

Organism: PLM3_127_b2_sep16_Tectomicrobia_60_8

near complete RP 45 / 55 MC: 1 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: comp(255..647)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family bin=GWF2_Geobacter_54_21 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 130.0
  • Bit_score: 89
  • Evalue 1.60e-15
HTH-type transcriptional regulator Smed_0045 similarity KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 123.0
  • Bit_score: 79
  • Evalue 6.10e-13
Tax=CG_Desulfob_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 34.1
  • Coverage: 138.0
  • Bit_score: 93
  • Evalue 2.00e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Desulfob_01 → Desulfobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
ATGTCTGCGATCAGAGACAGCAAGTTCATCGGCCAACGGATGCGTCAGTTACGGGAGGCAGCTGGGCTGTCGCAGAGCGAAGTAGCGGTTTTCCTCGATGTGTCCTATCAGCAGGTACAGAAGTACGAGCGCGGCAGTAATAAAATCAGCATCGAAAAGTTACAGCGGCTGGCCGAGGCCCTGCGGGTGCCGCTGACCGCCTTTTTTGAGGACACGCCTGTAGCTGCGTTCCTCCTGGAGCGGGTGGAAGAGGGGCAATCACACTATCAGCTCGCCCCGCTCTCGGGTCGTGAGTACGATGTGCTGCGCTGGTTCAGAGCGCTCCCGGATGAGGAATGGCGCACCTGCTTCATGACCTTCCTCAAACTTGTGGCACAGATGCAGCAGCGCTAG
PROTEIN sequence
Length: 131
MSAIRDSKFIGQRMRQLREAAGLSQSEVAVFLDVSYQQVQKYERGSNKISIEKLQRLAEALRVPLTAFFEDTPVAAFLLERVEEGQSHYQLAPLSGREYDVLRWFRALPDEEWRTCFMTFLKLVAQMQQR*