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PLM3_127_b2_sep16_scaffold_2305_11

Organism: PLM3_127_b2_sep16_Eisenbacteria_70_8

partial RP 40 / 55 MC: 3 BSCG 38 / 51 MC: 2 ASCG 9 / 38
Location: 8478..9806

Top 3 Functional Annotations

Value Algorithm Source
R3H domain protein Tax=Megasphaera elsdenii DSM 20460 RepID=G0VMG8_MEGEL bin=16ft_combo_ws3_JS1 species=Megasphaera elsdenii genus=Megasphaera taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 165.0
  • Bit_score: 225
  • Evalue 8.20e-56
single-stranded nucleic acid binding R3H domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 30.1
  • Coverage: 405.0
  • Bit_score: 139
  • Evalue 1.30e-30
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 165.0
  • Bit_score: 225
  • Evalue 1.20e-55

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1329
ATGGCGGGTCACAAGGAATCGGTGTTCGAAGGCAAGACGCTCGATGACGCAGTACGCATGGGCCTGAACGCGCTGCAACTCTCTCGCGCCGAGGTGATGATCACCGTGCTCGAGGAGGGCTCGGGGGGATTCCTCGGGCTCGGGGCGCGTCCGTACAAGGTACGGGTGATGCCGCGCCCCGGAGGCCCGCCCCGGGAGCCCTCGGCACGCGGGGAGCGTGAGGATCGTACGCGAGGCGGGCGCGGGGGACGCGGTCGCCGTGAGCGGAGTGGATCGCGCGGCGAGGGACGGGGCGAGCCGCAGCGCGCGGGCCGGGCCGACGCTCGCGACGCTCACGATCCATCTCGCGCGCCTAGCGAACGTGGACGTGAGGGACGGGGCGAACCACAGCGTGCCGGTCGGAACGAGAGCCGCGGCGGGGACCGGGAGCGCGGGCGCGATGGGCGGGGCGGGGGCCGCGAGCGGGATCGCTCCGGGCGCGAGACGGCTTTCGCGGCGGACTCCCGCGGCGAGGACGCGGGTCCCGCGCGCGAGAGGCCGACGTCCGGGGGCGAGGGGAATCCGCCCGGGCCCGAGCGGGCGCCGTACGCCGGGGGCGAAGGGCGCCGGCGCCGTCGCGGTCGCCGGGGTGGGCGCGGACGCGGTGAGGATCGTCCGATGGAAGTGGAGACTCCGACCGTCGGCGCCGTCGCGGTGGCTCCGGAAGGGGCGGCGACGGAGTTCTCGCCGGGCGGGCCTTCGGCGGCGATGGGAGACATCCCACCGCCTCCTGAGCCTCGCGAGCGGTCTCGGCGTGATGAGCGCGACGACCACGGCGAGTCCCGCCCGACGGGGCCGATCCTCCCGGCGGCCGAGCTGGAAGCGCGCGCGAAGCGCGCCACCGACGAGTTGCTCCGCGCGATGGGATTCGAAGGCCGCGTCTCGGTGCGCGCCGAGGGCGACAACGTCGACGTCACCGCAGAAGTGTCCGAGGGTGAGGATCTGCTGACCGGCCGCAAGGGCGAGGTTCGCCAGGCGCTGCAACACCTGCTGAACCTGACGGTGAATCGCGGCGAGGGGATGCGCTACCACCTCCAGCTCGAGATCAACGATTTCTGGCAGCGGCGCGAGAAGGAGCTGGAAGGCCTCGCCCGCTCGATGGCCGATGACGCGGTGGCCCGCGGGGGCGAGGTGTTGACCGAGTACCTGAACGCCCAGGAGCGCCGGATCATCCACGTCACGCTGCGCGAAGACCCGCGGGTGAAGACGTACGCCATCGGCGACGGGTTGATCAAGAAACTGGCCGTAGCCCCGGCCGATCAACCGGAGGCGTCGAGAGAAACGGACTGA
PROTEIN sequence
Length: 443
MAGHKESVFEGKTLDDAVRMGLNALQLSRAEVMITVLEEGSGGFLGLGARPYKVRVMPRPGGPPREPSARGEREDRTRGGRGGRGRRERSGSRGEGRGEPQRAGRADARDAHDPSRAPSERGREGRGEPQRAGRNESRGGDRERGRDGRGGGRERDRSGRETAFAADSRGEDAGPARERPTSGGEGNPPGPERAPYAGGEGRRRRRGRRGGRGRGEDRPMEVETPTVGAVAVAPEGAATEFSPGGPSAAMGDIPPPPEPRERSRRDERDDHGESRPTGPILPAAELEARAKRATDELLRAMGFEGRVSVRAEGDNVDVTAEVSEGEDLLTGRKGEVRQALQHLLNLTVNRGEGMRYHLQLEINDFWQRREKELEGLARSMADDAVARGGEVLTEYLNAQERRIIHVTLREDPRVKTYAIGDGLIKKLAVAPADQPEASRETD*