ggKbase home page

PLM3_127_b2_sep16_scaffold_11829_2

Organism: PLM3_127_b2_sep16_Eisenbacteria_70_8

partial RP 40 / 55 MC: 3 BSCG 38 / 51 MC: 2 ASCG 9 / 38
Location: comp(464..1930)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IS30_NATPD similarity UNIREF
DB: UNIREF100
  • Identity: 31.8
  • Coverage: 450.0
  • Bit_score: 197
  • Evalue 2.60e-47
rtcB_2; RtcB-like protein 2 similarity KEGG
DB: KEGG
  • Identity: 31.8
  • Coverage: 450.0
  • Bit_score: 197
  • Evalue 7.50e-48
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_12_45_13b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 30.1
  • Coverage: 478.0
  • Bit_score: 221
  • Evalue 1.40e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_12_45_13b → RIF-OD1-12 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1467
ATGAACAGCCCGTCCGATCTGGGAAGCGCGCTGGACTACACGTCGTCCCGCGCCATCCGTGAAGTCGCATCGCCGCAGGACAAACTGATCAAGCTCTCGCTGGGCGACGAGATCCCCCGTCCCATCCTTGAAATCCTGGAGCGGATGGCGGGCCTGCCGTTCGTGGACTCCGTCCTCGCGCTCCCCGACGTCCACTGGAAGGAGCAGATGGAGGTGCCGTCCAGCATCTCCGTGACCACCCGCGACATCGTGGTGCCCGAATTCACGTCGATGGCCGTGAACGACGGGATGGGGGTGGTCAGGACCGGGCTCAAGGTCGAAGACATGTCACCGGAGCGTCTGGAGGCCTTCTTCACCAGGGTCAACTCCCATGCGGCCGCGAATTTCTACGACACCAACCGCTACAGCATCTCGCCCGACGAGCTGCGGCGGGTCCTCTACGAGGGCGCTCGGGGCCTGCTCGCGCGCTACGGGATGGACGAGTCCATGCTGGAGCGGATCGAGGACGGCGGACGTTATCCGTCGACCACGCTCGGGAATGGGAGCCTGACGGAAATGGTGCCGATCCAGATGCTCACGAAGTTCAGCCGCTCGGAGATGGGGCTCAACTTCGGCGGCAATCACTTCCTCGAGGTCCAGGCGGTGGACGAGGTGCTGGACGAGGATGTGGCCCGGCGCTGGAGCTTCGAGCGCGGGCAGGTGGTCGTCATGTATCACCTGGGCCCGGGGCCGCTGGGCGGGACGCTGCTCAACCACTACTCGCGCCGGACCAAGCTCCAGAGCTCGCGGGTCCCCCTCTTCTTCTTCTCGAAGCTGCTCTTCCATTACGTGCAGCGAATGGGACGAGGAGCGGTGGGGAAGAAGTGGGGGGTCCATTTCCGCCAGAACGGTTGGACCCCGCTCCCGGCGGAGTCCGAGGAGGGCATCCTCATTCGCCGGGCGATGGCGATGGCGATCAACTACGGCTACGGCTACCGCCTCGGCACCATCCGCGCGATCCGCGACGGTCTGCACGAGGCGATCTCGCCGACTCTCTCGGGCGAGCTCTTCTGCGACATCACCCACAACGGGGCCGCCGAGACCAGCTCGGCGGAGGGGTTCTCCTGGATCGCGCGGCACAACGCCTGCCCGCTCGAGCACGGGAAGCCGACTATCGTTGCGGGATCGTGCGACGTGCACTCCTACCTCGGCATCGGGGGCGGGGGCATCAGCAGCCGGCTCAACTCCTACGATCACGGGGCGGGAAACCTCATCGAGCACTACCGGGAAGCCGGACGACTGAGCGAGGTGCCGGGGGGGGTCCTGCGCTTCCGGATGACCCGGGGACGCCAGGCAATCCTCAAGTCACGCAAGGAGATCCCGCTGCGTACGTCGGAGCCGATCGACCGGCTCATGGAGTGCTTCGAGCAGCACGGCATCATGCGGCCGGTCCTCAAGCTCCGTCCGCTCGGGAATCTGAAGAACTAG
PROTEIN sequence
Length: 489
MNSPSDLGSALDYTSSRAIREVASPQDKLIKLSLGDEIPRPILEILERMAGLPFVDSVLALPDVHWKEQMEVPSSISVTTRDIVVPEFTSMAVNDGMGVVRTGLKVEDMSPERLEAFFTRVNSHAAANFYDTNRYSISPDELRRVLYEGARGLLARYGMDESMLERIEDGGRYPSTTLGNGSLTEMVPIQMLTKFSRSEMGLNFGGNHFLEVQAVDEVLDEDVARRWSFERGQVVVMYHLGPGPLGGTLLNHYSRRTKLQSSRVPLFFFSKLLFHYVQRMGRGAVGKKWGVHFRQNGWTPLPAESEEGILIRRAMAMAINYGYGYRLGTIRAIRDGLHEAISPTLSGELFCDITHNGAAETSSAEGFSWIARHNACPLEHGKPTIVAGSCDVHSYLGIGGGGISSRLNSYDHGAGNLIEHYREAGRLSEVPGGVLRFRMTRGRQAILKSRKEIPLRTSEPIDRLMECFEQHGIMRPVLKLRPLGNLKN*